Factsheet for TraesCS5B01G366600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G374100.1	Wheat	extracellular, vacuole	89.86	87.39
HORVU5Hr1G089770.2	Barley	plastid	38.44	84.46
TraesCS5A01G365000.1	Wheat	extracellular	87.97	80.56
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	25.0	51.46
KRH43685	Soybean	plastid	25.71	43.95
Os09t0560850-00	Rice	cytosol, endoplasmic reticulum, peroxisome	58.02	42.34
KXG36188	Sorghum	cytosol, endoplasmic reticulum, vacuole	53.07	41.51
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	23.58	39.53
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	52.83	39.09
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	32.78	37.77
PGSC0003DMT400025000	Potato	nucleus	24.53	37.41
Solyc12g017360.1.1	Tomato	cytosol, peroxisome, plastid	25.94	37.29
TraesCS7B01G384100.1	Wheat	extracellular	19.34	36.94
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	25.47	34.5
Solyc05g016390.2.1	Tomato	endoplasmic reticulum, extracellular	20.99	34.5
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	26.18	34.37
KRG90034	Soybean	extracellular, plasma membrane	23.35	33.45
KRH13771	Soybean	vacuole	28.3	33.43
AT1G79480.1	Thale cress	extracellular	29.25	31.23
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	25.94	30.81
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	27.83	30.65
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	28.07	30.59
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	27.36	29.67
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	8.96	27.74
TraesCS5B01G398000.1	Wheat	extracellular	10.14	26.22
TraesCS5B01G399400.1	Wheat	extracellular	9.67	25.95
TraesCS2B01G272100.1	Wheat	extracellular	10.38	25.43
TraesCS5B01G465400.1	Wheat	extracellular, plasma membrane	9.91	23.08
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	9.67	23.03
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	9.91	21.21
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	13.21	21.05
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	15.33	19.7
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	9.2	18.66
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	8.96	18.54
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	16.98	17.65
TraesCS3B01G257100.1	Wheat	extracellular	12.5	15.54
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	9.67	14.91

Protein Annotations

EnsemblPlants:TraesCS5B01G366600.1	EnsemblPlantsGene:TraesCS5B01G366600	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237	PFAM:PF07983
PRINTS:PR01217	SEG:seg	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:+:545404132..545406136

Molecular Weight (calculated)

43019.5 Da

IEP (calculated)

4.041

GRAVY (calculated)

-0.325

Length

424 amino acids

Sequence
(BLAST)

001: MAISPAPAPS PSLHRKKHLP AMGECKSSRR TSRPLLLPAI VVVLAFFVAQ CGARVLTVDE LLDQYSESDH HSASPPPGSP GCAPEPEASP PPVIPAPSFA
101: YLSPPPPMQF YSPPPPEVVP SPPEITPSPP EVVPSPPEIA PLPPVVAPSP PEIAPLPPVV APSPXXXXPS PPEVAPSPPE VAPLPGPPEV TPSPPEVAPF
201: PGPPEVTPSP PDVTPFPGPP EVEPSPPDVT PSPGPPEVEP SPPDVTPSPG PPEVTPSPPE VTPFPGTPYV APSPPEVTPF PSPPEVTPSP PDYAPYPPPE
301: SSPGSGSSPS PPGGSFQPPV VLPPTTGPPS PSAGHGEWCV AKPSVPAAIV QQAMDYACAS GADCESLQAD GACFKPDTMT SHASYAFNSY WQRAKSTGAT
401: CDFGGTAMLI TKDPSYDNCH YSVM

Best Arabidopsis Sequence Match ( AT1G79480.2 )
(BLAST)

001: MESYRVFTTI CLLLCLFLSA NFFTHYVDAR KSVGFEREPK KVMMIKALKH TSLLQKMMTQ LNLAQPLDYS SSSNTQPYGV STTLTLPPYV SLPPLSVPGN
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.