Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 97.58 | 97.58 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 97.27 | 97.27 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 59.7 | 57.77 |
| KXG27714 | Sorghum | vacuole | 59.7 | 57.1 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 32.73 | 35.88 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 31.52 | 35.25 |
| CDX94970 | Canola | plastid | 31.52 | 35.14 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 42.12 | 34.07 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 36.97 | 33.7 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 13.94 | 33.58 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 33.33 | 33.33 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 36.97 | 33.24 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 30.91 | 33.22 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 16.97 | 32.37 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 20.3 | 30.18 |
| CDY32184 | Canola | vacuole | 31.82 | 29.75 |
| CDY31085 | Canola | plastid | 31.52 | 29.63 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 14.24 | 28.66 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 23.03 | 28.57 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 15.76 | 28.57 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 13.64 | 28.48 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 14.85 | 27.53 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 15.76 | 25.37 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.06 | 25.36 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 14.55 | 24.24 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 45.15 | 24.23 |
| KRH33760 | Soybean | vacuole | 43.03 | 23.24 |
| KRG90471 | Soybean | vacuole | 42.73 | 23.19 |
| KRH68400 | Soybean | extracellular | 35.45 | 21.75 |
| KRG96680 | Soybean | extracellular | 34.85 | 21.74 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 30.3 | 21.32 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 17.58 | 21.09 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 32.73 | 20.49 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 20.91 | 20.23 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 21.52 | 19.89 |
| TraesCS5B01G366600.1 | Wheat | plastid | 19.7 | 15.33 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G138000.1 | EnsemblPlantsGene:TraesCS4B01G138000 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4B:-:181697380..181699413
Molecular Weight (calculated)
33261.7 Da
IEP (calculated)
4.042
GRAVY (calculated)
0.033
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRLLFLLF LLACSLLFLE LPSVSGKPTV HDDLDPAQVT NPTTPITVPS TNPAPTIITV PSTNPTITIP SLNPLPTPIT TPSNDPSTTL PLPTPSTSAP
101: NTPVTIPVTT PSTFPPSAPL TNPATNPMVP TVGTTPPTAP TTTPVTAPVV SGQQAWCVAK AGSSETALQD ALDYACGIGG ADCSPIQPSG SCYYPNTLEA
201: HASYAFNSYY QKNPAPSSCD FRGAAVLANA NPSSGTCILA SSMSSPTSST AGSTAPTTSS TSPVTSSSGS DPGSSVLNSS GSGISGSSDF GSDFPGEANT
301: GNGWHSILPS GWSWAGLFST LALPYVGGIF
101: NTPVTIPVTT PSTFPPSAPL TNPATNPMVP TVGTTPPTAP TTTPVTAPVV SGQQAWCVAK AGSSETALQD ALDYACGIGG ADCSPIQPSG SCYYPNTLEA
201: HASYAFNSYY QKNPAPSSCD FRGAAVLANA NPSSGTCILA SSMSSPTSST AGSTAPTTSS TSPVTSSSGS DPGSSVLNSS GSGISGSSDF GSDFPGEANT
301: GNGWHSILPS GWSWAGLFST LALPYVGGIF
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.