Factsheet for TraesCS3B01G334200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, plasma membrane

Predictor Summary:

golgi 2
extracellular 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, plasma membrane
Any Predictor:	nucleus, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G299600.1	Wheat	extracellular	68.0	95.41
TraesCS3A01G302400.1	Wheat	extracellular	67.27	94.39
HORVU3Hr1G074010.3	Barley	cytosol, plastid	86.91	82.13
OQU87600	Sorghum	extracellular	41.82	61.17
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	41.45	60.64
Os01t0763900-01	Rice	extracellular	45.45	60.39
KRH54678	Soybean	extracellular, nucleus	21.82	54.05
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	33.82	44.5
GSMUA_Achr7P26650_001	Banana	extracellular	18.55	43.97
TraesCS5B01G398000.1	Wheat	extracellular	25.82	43.29
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	29.45	42.19
GSMUA_Achr8P28170_001	Banana	extracellular	23.64	41.94
TraesCS5B01G399400.1	Wheat	extracellular	24.0	41.77
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.55	40.98
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	28.36	40.84
GSMUA_Achr9P07140_001	Banana	extracellular	27.27	40.32
PGSC0003DMT400045877	Potato	extracellular	15.64	40.19
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	28.73	39.9
GSMUA_Achr5P08900_001	Banana	extracellular	27.27	39.47
Solyc03g115200.2.1	Tomato	extracellular	26.18	38.5
PGSC0003DMT400063348	Potato	extracellular	25.82	38.38
KRH03122	Soybean	extracellular, nucleus	28.0	37.93
CDX96707	Canola	extracellular	25.45	37.84
AT1G18650.1	Thale cress	extracellular	25.09	37.5
AT5G61130.1	Thale cress	extracellular	27.27	37.31
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	32.73	37.04
CDX83826	Canola	extracellular	24.73	36.96
VIT_01s0011g00570.t01	Wine grape	extracellular	25.82	36.79
Bra026879.1-P	Field mustard	extracellular	18.91	36.62
CDY26741	Canola	extracellular	24.73	36.56
Bra035941.1-P	Field mustard	extracellular	26.18	36.18
CDY16822	Canola	extracellular	25.82	35.68
CDY16115	Canola	extracellular	20.0	35.48
CDY51213	Canola	extracellular	20.73	35.4
CDY23085	Canola	extracellular, plasma membrane, vacuole	24.73	35.23
CDX87201	Canola	extracellular	25.45	35.18
CDY19232	Canola	extracellular	24.0	35.11
PGSC0003DMT400003054	Potato	extracellular	24.36	35.08
CDY02169	Canola	extracellular	24.73	35.05
CDY42854	Canola	extracellular	24.73	34.87
Bra025116.1-P	Field mustard	extracellular	20.36	34.78
Bra026878.1-P	Field mustard	extracellular	17.82	34.75
CDY65418	Canola	cytosol	18.55	34.69
CDY33795	Canola	extracellular	22.55	34.64
CDY16114	Canola	extracellular	22.55	34.64
Bra026880.1-P	Field mustard	extracellular	22.55	34.64
Bra029334.1-P	Field mustard	extracellular	24.36	34.36
CDY02987	Canola	extracellular	20.0	34.16
TraesCS5B01G465400.1	Wheat	extracellular, plasma membrane	22.55	34.07
AT2G03505.1	Thale cress	extracellular	20.73	33.93
VIT_17s0000g07260.t01	Wine grape	extracellular	25.45	33.82
Solyc01g010310.2.1	Tomato	extracellular	22.91	33.33
KRG89485	Soybean	extracellular	21.09	32.95
KRH56823	Soybean	extracellular	25.45	32.86
KRH50525	Soybean	extracellular	21.82	32.79
Solyc05g012380.2.1	Tomato	extracellular	24.0	32.67
PGSC0003DMT400072939	Potato	extracellular	24.36	32.52
Bra009313.1-P	Field mustard	extracellular	24.36	31.6
CDX69983	Canola	extracellular	24.36	31.6
CDY34558	Canola	extracellular	19.27	30.81
CDX96880	Canola	extracellular	19.27	30.81
Bra016724.1-P	Field mustard	extracellular	19.27	30.81
Bra012981.1-P	Field mustard	extracellular, vacuole	24.73	30.63
CDY54140	Canola	extracellular	23.27	30.62
KRH75030	Soybean	extracellular	23.64	30.23
KRH70882	Soybean	extracellular	23.64	29.95
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	21.45	29.95
CDY07353	Canola	extracellular	23.64	29.82
Bra004003.1-P	Field mustard	extracellular	23.64	29.82
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	21.09	29.59
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	21.09	29.59
AT5G08000.2	Thale cress	extracellular	22.91	29.58
CDY04273	Canola	extracellular	23.27	29.36
CDY50312	Canola	extracellular	22.91	29.3
CDX98134	Canola	extracellular	20.0	28.8
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	18.55	28.65
AT1G69295.1	Thale cress	extracellular	22.91	28.38
CDY65205	Canola	plasma membrane	20.36	28.28
CDX99038	Canola	extracellular	23.64	27.66
CDY36415	Canola	extracellular	19.64	27.55
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	23.64	27.43
Bra019700.1-P	Field mustard	extracellular	19.64	27.41
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	12.73	25.55
Bra038314.1-P	Field mustard	mitochondrion	20.73	25.22
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	19.27	25.12
TraesCS2B01G272100.1	Wheat	extracellular	15.27	24.28
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	23.27	24.06
Solyc04g005420.2.1	Tomato	extracellular, vacuole	24.36	21.82
TraesCS3B01G257100.1	Wheat	extracellular	25.09	20.23
TraesCS7B01G384100.1	Wheat	extracellular	14.55	18.02
CDY47016	Canola	extracellular	24.0	17.74
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	21.09	17.58
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	21.45	14.46
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	17.09	13.17
TraesCS5B01G366600.1	Wheat	plastid	14.91	9.67

Protein Annotations

EnsemblPlants:TraesCS3B01G334200.1	EnsemblPlantsGene:TraesCS3B01G334200	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SMART:SM00768	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3B:-:540475950..540477104

Molecular Weight (calculated)

27139.5 Da

IEP (calculated)

7.738

GRAVY (calculated)

-0.064

Length

275 amino acids

Sequence
(BLAST)

001: MVGKSGKERR GKGRGRPAAD IKHIAEGKLT PHYFSGVRSA ATHTPAAIVV EHSTQSQPAE ESARARALAR TSTNTSPIVT MASPAFLLLL LLAVSITGSD
101: AEWCVCRSDA NETALQETLD YACGQGADCA PVATGGSCHS PDSVVAHCSY AVNSYYQRSS QTKGATCDFG GTATLSSADP SSGTCKYPAT ASAAGTSTGN
201: GTATGTGTGT NSSSPGSTNP ATPGMGGSFT TPIGSASGPT ASIIGPESSG LGAAAAAFAG VRGLLGVAVA SVLAF

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.