Factsheet for TraesCS3A01G302400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G299600.1	Wheat	extracellular	95.41	95.41
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	94.39	67.27
HORVU3Hr1G074010.3	Barley	cytosol, plastid	93.88	63.23
Os01t0763900-01	Rice	extracellular	65.31	61.84
OQU87600	Sorghum	extracellular	58.67	61.17
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	58.16	60.64
KRH54678	Soybean	extracellular, nucleus	30.1	53.15
TraesCS1A01G332500.1	Wheat	extracellular	46.94	44.02
GSMUA_Achr7P26650_001	Banana	extracellular	26.02	43.97
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.88	43.0
GSMUA_Achr8P28170_001	Banana	extracellular	32.65	41.29
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	40.31	41.15
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	39.29	40.31
TraesCS5A01G393200.1	Wheat	extracellular	34.18	40.12
GSMUA_Achr9P07140_001	Banana	extracellular	37.76	39.78
PGSC0003DMT400045877	Potato	extracellular	21.43	39.25
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.29	39.09
GSMUA_Achr5P08900_001	Banana	extracellular	37.24	38.42
Solyc03g115200.2.1	Tomato	extracellular	36.22	37.97
PGSC0003DMT400063348	Potato	extracellular	35.71	37.84
CDX96707	Canola	extracellular	35.2	37.3
AT1G18650.1	Thale cress	extracellular	34.69	36.96
KRH03122	Soybean	extracellular, nucleus	38.27	36.95
AT5G61130.1	Thale cress	extracellular	37.76	36.82
CDX83826	Canola	extracellular	34.18	36.41
CDY26741	Canola	extracellular	34.18	36.02
Bra026879.1-P	Field mustard	extracellular	26.02	35.92
VIT_01s0011g00570.t01	Wine grape	extracellular	35.2	35.75
Bra035941.1-P	Field mustard	extracellular	36.22	35.68
CDY16822	Canola	extracellular	35.71	35.18
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	43.37	34.98
CDY16115	Canola	extracellular	27.55	34.84
CDY51213	Canola	extracellular	28.57	34.78
CDY23085	Canola	extracellular, plasma membrane, vacuole	34.18	34.72
CDX87201	Canola	extracellular	35.2	34.67
CDY19232	Canola	extracellular	33.16	34.57
PGSC0003DMT400003054	Potato	extracellular	33.67	34.55
CDY02169	Canola	extracellular	34.18	34.54
CDY42854	Canola	extracellular	34.18	34.36
Bra025116.1-P	Field mustard	extracellular	28.06	34.16
Bra026880.1-P	Field mustard	extracellular	31.12	34.08
CDY33795	Canola	extracellular	31.12	34.08
CDY16114	Canola	extracellular	31.12	34.08
Bra026878.1-P	Field mustard	extracellular	24.49	34.04
CDY65418	Canola	cytosol	25.51	34.01
Bra029334.1-P	Field mustard	extracellular	33.67	33.85
CDY02987	Canola	extracellular	27.55	33.54
AT2G03505.1	Thale cress	extracellular	28.57	33.33
VIT_17s0000g07260.t01	Wine grape	extracellular	35.2	33.33
TraesCS5A01G456400.1	Wheat	extracellular, plasma membrane	30.61	32.97
Solyc01g010310.2.1	Tomato	extracellular	31.63	32.8
KRG89485	Soybean	extracellular	29.08	32.39
KRH50525	Soybean	extracellular	30.1	32.24
KRH56823	Soybean	extracellular	34.69	31.92
Solyc05g012380.2.1	Tomato	extracellular	32.14	31.19
CDX69983	Canola	extracellular	33.67	31.13
Bra009313.1-P	Field mustard	extracellular	33.67	31.13
TraesCS5A01G548300.1	Wheat	plasma membrane	31.12	31.12
PGSC0003DMT400072939	Potato	extracellular	32.65	31.07
CDX96880	Canola	extracellular	26.53	30.23
CDY34558	Canola	extracellular	26.53	30.23
Bra016724.1-P	Field mustard	extracellular	26.53	30.23
Bra012981.1-P	Field mustard	extracellular, vacuole	34.18	30.18
CDY54140	Canola	extracellular	32.14	30.14
Bra004003.1-P	Field mustard	extracellular	33.16	29.82
CDY07353	Canola	extracellular	33.16	29.82
KRH75030	Soybean	extracellular	32.65	29.77
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	29.59	29.44
CDY04273	Canola	extracellular	32.65	29.36
AT5G08000.2	Thale cress	extracellular	31.63	29.11
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	29.08	29.08
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	29.08	29.08
KRH70882	Soybean	extracellular	32.14	29.03
CDY50312	Canola	extracellular	31.63	28.84
CDX98134	Canola	extracellular	27.55	28.27
AT1G69295.1	Thale cress	extracellular	31.63	27.93
CDY65205	Canola	plasma membrane	28.06	27.78
CDX99038	Canola	extracellular	33.16	27.66
CDY36415	Canola	extracellular	27.55	27.55
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	25.0	27.53
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.65	27.0
Bra019700.1-P	Field mustard	extracellular	27.04	26.9
Bra038314.1-P	Field mustard	mitochondrion	30.1	26.11
TraesCS2A01G252300.1	Wheat	extracellular	21.94	24.86
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	26.53	24.64
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.67	24.54
TraesCS5A01G390800.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	16.84	23.74
TraesCS3A01G227300.1	Wheat	extracellular	32.65	19.22
Solyc04g005420.2.1	Tomato	extracellular, vacuole	30.1	19.22
TraesCS7A01G481700.1	Wheat	extracellular	20.41	18.26
CDY47016	Canola	extracellular	33.16	17.47
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	28.57	16.97
TraesCS4A01G358500.1	Wheat	extracellular	29.08	13.9
TraesCS2A01G425000.1	Wheat	plastid	22.45	12.19
TraesCS5A01G365000.1	Wheat	extracellular	20.92	8.86

Protein Annotations

EnsemblPlants:TraesCS3A01G302400.1	EnsemblPlantsGene:TraesCS3A01G302400	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:535727238..535728616

Molecular Weight (calculated)

19042.0 Da

IEP (calculated)

4.665

GRAVY (calculated)

0.112

Length

196 amino acids

Sequence
(BLAST)

001: MMRSPVFLLL LLLAVSIRGS EAEWCVCRSD ANETALQETL DYACGQGADC APVGTGGSCH SPDSVAAHCS YAVNSYYQRN SQTKGATCDF GGTATLSSAD
101: PSSGTCKYPA TASAAGTSTG NGTATGTGTG TNSSSPGSTN PATPGMGGSF TTPIGSASGP TASIIGPESS GFAAAAAAFA GVRGLVGVAV ASVLAF

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.