Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 97.27 | 97.27 |
| TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 96.67 | 96.67 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 59.39 | 57.48 |
| KXG27714 | Sorghum | vacuole | 59.7 | 57.1 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 33.03 | 36.21 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 31.82 | 35.59 |
| CDX94970 | Canola | plastid | 31.82 | 35.47 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 31.82 | 34.2 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 42.12 | 33.9 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 33.33 | 33.33 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 36.06 | 32.87 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 36.36 | 32.7 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 16.67 | 31.79 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 13.33 | 31.65 |
| CDY32184 | Canola | vacuole | 32.73 | 30.59 |
| CDY31085 | Canola | plastid | 32.42 | 30.48 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 17.27 | 29.08 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 23.33 | 28.62 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 15.76 | 28.57 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 16.97 | 28.57 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 18.79 | 28.31 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 13.94 | 27.54 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 14.85 | 27.53 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.67 | 27.5 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 16.06 | 25.36 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 14.85 | 24.87 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 44.85 | 24.07 |
| KRG90471 | Soybean | vacuole | 41.52 | 22.53 |
| KRH33760 | Soybean | vacuole | 41.52 | 22.42 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 30.91 | 21.75 |
| KRH68400 | Soybean | extracellular | 34.85 | 21.38 |
| KRG96680 | Soybean | extracellular | 34.24 | 21.36 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 33.64 | 21.06 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 20.91 | 20.72 |
| TraesCS2A01G425000.1 | Wheat | plastid | 20.91 | 19.11 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 21.52 | 15.33 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G178000.1 | EnsemblPlantsGene:TraesCS4A01G178000 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4A:-:449894478..449896357
Molecular Weight (calculated)
33346.8 Da
IEP (calculated)
4.029
GRAVY (calculated)
-0.006
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRLLFLLL PLACSLLFLE LPSVSGKPTV HDDLDPAQVT NPTTPITVPS TNPTPTIITV PSTNPTITIP SLNPLPTPIT TPSNDPSTTL PLPTPSTSAP
101: NTPVTIPVTT PSTFPPSAPL TNPATNPMVP TVGTTPPTSP TTTPVTAPVV SGQQAWCVAK AGSSQTALQD ALDYACGIGG ADCSPIQPSG SCYYPNTLEA
201: HASYAFNSYY QKNPAPSSCD FRGAAMLANA NPSSATCVLA SSMSSPTSST AGSTAPTTSS TSPVTSSSDS DPGSSVLNSS GSGISGSSDF GSDFPGEANT
301: GNGWHSILPS GWSWAGLFST LALPYVGGIF
101: NTPVTIPVTT PSTFPPSAPL TNPATNPMVP TVGTTPPTSP TTTPVTAPVV SGQQAWCVAK AGSSQTALQD ALDYACGIGG ADCSPIQPSG SCYYPNTLEA
201: HASYAFNSYY QKNPAPSSCD FRGAAMLANA NPSSATCVLA SSMSSPTSST AGSTAPTTSS TSPVTSSSDS DPGSSVLNSS GSGISGSSDF GSDFPGEANT
301: GNGWHSILPS GWSWAGLFST LALPYVGGIF
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPS
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPS
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.