Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 92.13 | 92.13 |
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 91.57 | 91.57 |
| Os06t0537700-01 | Rice | extracellular | 75.84 | 72.58 |
| OQU76517 | Sorghum | extracellular | 69.66 | 71.26 |
| Zm00001d046155_P001 | Maize | extracellular | 67.42 | 68.18 |
| HORVU0Hr1G021440.2 | Barley | plastid | 56.74 | 63.92 |
| GSMUA_Achr10P... | Banana | extracellular | 56.18 | 56.5 |
| KRH55823 | Soybean | extracellular | 43.26 | 44.25 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 42.13 | 43.1 |
| Bra003318.1-P | Field mustard | extracellular | 38.2 | 40.0 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 38.2 | 40.0 |
| KRH25694 | Soybean | extracellular | 38.76 | 39.88 |
| CDY56240 | Canola | extracellular | 38.2 | 39.31 |
| KRH27014 | Soybean | extracellular | 37.64 | 38.29 |
| CDY70929 | Canola | extracellular | 38.2 | 37.78 |
| CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 37.64 | 37.43 |
| Bra004688.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 37.64 | 37.22 |
| KRH22312 | Soybean | extracellular | 38.2 | 37.16 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 44.94 | 35.56 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 26.97 | 28.74 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.46 | 28.43 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 21.91 | 28.06 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 28.65 | 28.02 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.65 | 25.5 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 24.72 | 25.43 |
| AT3G58100.2 | Thale cress | cytosol | 36.52 | 25.39 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 27.53 | 25.0 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 44.94 | 23.12 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 26.97 | 22.97 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 23.6 | 19.18 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 20.22 | 18.37 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 25.28 | 16.73 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 27.53 | 14.85 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 26.4 | 14.11 |
| TraesCS2A01G425000.1 | Wheat | plastid | 27.53 | 13.57 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 29.78 | 12.93 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 23.03 | 8.86 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G346300.1 | EnsemblPlantsGene:TraesCS7A01G346300 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7A:+:509459742..509463999
Molecular Weight (calculated)
18027.1 Da
IEP (calculated)
5.504
GRAVY (calculated)
0.277
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASPPSLH LALLLFAVRA AVSGAAGAVG VSGGGQLWCV AKNNAEDGAL QSAIDWACGP DGGADCRAIQ QGGACYEPPD LLAHASYAFN DYFLRSGGAA
101: SPAACDFSGA AALIGLNPSH GNCVFPSSSS PRNGSFTGIT TYGRTGADLS QSSSWQLNTW SFILCISLSA TIFVVSRF
101: SPAACDFSGA AALIGLNPSH GNCVFPSSSS PRNGSFTGIT TYGRTGADLS QSSSWQLNTW SFILCISLSA TIFVVSRF
001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.