Factsheet for Os06t0537700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	72.58	75.84
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	69.89	73.03
TraesCS7D01G332800.1	Wheat	plasma membrane	69.35	72.47
OQU76517	Sorghum	extracellular	66.67	71.26
Zm00001d046155_P001	Maize	extracellular	66.13	69.89
GSMUA_Achr10P...	Banana	extracellular	53.76	56.5
HORVU0Hr1G021440.2	Barley	plastid	44.09	51.9
KRH55823	Soybean	extracellular	46.77	50.0
VIT_12s0028g02540.t01	Wine grape	extracellular	44.09	47.13
KRH25694	Soybean	extracellular	42.47	45.66
KRH27014	Soybean	extracellular	38.17	40.57
Bra003318.1-P	Field mustard	extracellular	36.56	40.0
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.56	40.0
CDY56240	Canola	extracellular	36.56	39.31
KRH22312	Soybean	extracellular	37.63	38.25
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.56	37.99
CDY70929	Canola	extracellular	36.56	37.78
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	36.02	37.22
Solyc07g053430.2.1	Tomato	endoplasmic reticulum, extracellular	42.47	35.11
Os01t0763900-01	Rice	extracellular	32.26	28.99
Os03t0756300-01	Rice	extracellular	26.88	28.57
Os07t0600700-01	Rice	extracellular	29.57	28.35
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	28.49	28.19
AT3G58100.2	Thale cress	cytosol	36.56	26.56
Os05t0512600-01	Rice	extracellular	31.18	25.44
PGSC0003DMT400024290	Potato	extracellular, vacuole	42.47	22.83
Os06t0665200-00	Rice	cytosol	22.04	19.16
Os01t0631500-01	Rice	extracellular	27.96	18.64
Os05t0581900-01	Rice	extracellular	26.34	17.44
Os10t0347000-01	Rice	endoplasmic reticulum, extracellular, vacuole	22.58	12.21
Os03t0833600-01	Rice	plasma membrane	34.41	11.15
Os09t0560850-00	Rice	cytosol, endoplasmic reticulum, peroxisome	23.66	7.57

Protein Annotations

MapMan:35.1	EntrezGene:4341218	ProteinID:BAD54322.1	ProteinID:BAF19709.1	ProteinID:BAS98107.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
EnsemblPlantsGene:Os06g0537700	EnsemblPlants:Os06t0537700-01	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118	UniProt:Q5Z6U7
SMART:SM00768	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000446FF2	InterPro:X8	RefSeq:XP_015641606.1
SEG:seg	:	:	:	:	:

Description

X8 domain containing protein. (Os06t0537700-01)

Coordinates

chr6:-:20145118..20148062

Molecular Weight (calculated)

18423.6 Da

IEP (calculated)

4.353

GRAVY (calculated)

0.367

Length

186 amino acids

Sequence
(BLAST)

001: MPAASSPLPL PLLLLLLLAV AGAGAAGAGA GVGVSGGGQL WCVAKNNADD AALQAAVDWA CGPAGGADCR AIQQGGACYD PPDLLAHASY AFNDYFLRAG
101: GAPAAPAACD FSGAAALTAL NPSHGSCVFP SSTSPKNGSF TGTTTYGPAG ADLSKSSSRQ LNFWSLLLCI CLSVTFFDAF PSDTFS

Best Arabidopsis Sequence Match ( AT3G58100.2 )
(BLAST)

001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL

Arabidopsis Description

PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.