Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004688.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 99.44 | 98.89 |
| CDY70929 | Canola | extracellular | 94.97 | 94.44 |
| CDY56240 | Canola | extracellular | 55.87 | 57.8 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.75 | 57.65 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 42.46 | 43.68 |
| KRH25694 | Soybean | extracellular | 39.66 | 41.04 |
| KRH27014 | Soybean | extracellular | 39.66 | 40.57 |
| KRH55823 | Soybean | extracellular | 39.11 | 40.23 |
| GSMUA_Achr10P... | Banana | extracellular | 39.66 | 40.11 |
| Zm00001d046155_P001 | Maize | extracellular | 37.99 | 38.64 |
| OQU76517 | Sorghum | extracellular | 36.87 | 37.93 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 37.43 | 37.64 |
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 36.87 | 37.08 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 36.87 | 37.08 |
| KRH22312 | Soybean | extracellular | 37.43 | 36.61 |
| Os06t0537700-01 | Rice | extracellular | 37.99 | 36.56 |
| CDY56715 | Canola | cytosol | 22.91 | 36.28 |
| CDY48582 | Canola | cytosol | 26.26 | 33.1 |
| CDY21992 | Canola | cytosol | 26.26 | 33.1 |
| CDY47296 | Canola | extracellular | 21.23 | 31.93 |
| CDX74636 | Canola | extracellular | 21.23 | 31.93 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 39.11 | 31.11 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 21.23 | 30.4 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 20.67 | 29.84 |
| HORVU0Hr1G021440.2 | Barley | plastid | 26.26 | 29.75 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 18.99 | 28.1 |
| CDY65418 | Canola | cytosol | 20.67 | 25.17 |
| CDY16115 | Canola | extracellular | 21.23 | 24.52 |
| CDY51213 | Canola | extracellular | 21.79 | 24.22 |
| CDY02987 | Canola | extracellular | 21.79 | 24.22 |
| CDY16114 | Canola | extracellular | 23.46 | 23.46 |
| CDY16822 | Canola | extracellular | 25.7 | 23.12 |
| CDY01142 | Canola | extracellular | 24.02 | 22.75 |
| CDX87201 | Canola | extracellular | 25.14 | 22.61 |
| CDY42854 | Canola | extracellular | 24.58 | 22.56 |
| CDY33795 | Canola | extracellular | 22.35 | 22.35 |
| CDX83826 | Canola | extracellular | 22.91 | 22.28 |
| CDX69983 | Canola | extracellular | 26.26 | 22.17 |
| CDX96707 | Canola | extracellular | 22.91 | 22.16 |
| CDX96880 | Canola | extracellular | 21.23 | 22.09 |
| CDY34558 | Canola | extracellular | 21.23 | 22.09 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 22.91 | 21.93 |
| CDY19232 | Canola | extracellular | 22.91 | 21.81 |
| CDY23085 | Canola | extracellular, plasma membrane, vacuole | 23.46 | 21.76 |
| CDY02169 | Canola | extracellular | 23.46 | 21.65 |
| CDY26741 | Canola | extracellular | 22.35 | 21.51 |
| CDX97778 | Canola | extracellular | 26.26 | 20.52 |
| CDY29629 | Canola | extracellular | 26.26 | 20.52 |
| CDX99038 | Canola | extracellular | 26.82 | 20.43 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 39.11 | 20.23 |
| CDY07353 | Canola | extracellular | 24.58 | 20.18 |
| CDY36415 | Canola | extracellular | 21.79 | 19.9 |
| CDX98134 | Canola | extracellular | 21.23 | 19.9 |
| CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.23 | 19.39 |
| CDY04273 | Canola | extracellular | 23.46 | 19.27 |
| CDY65205 | Canola | plasma membrane | 21.23 | 19.19 |
| CDY54140 | Canola | extracellular | 22.35 | 19.14 |
| CDY50312 | Canola | extracellular | 22.35 | 18.6 |
| CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.91 | 17.3 |
| CDX99818 | Canola | extracellular | 27.93 | 16.95 |
| CDY43335 | Canola | extracellular | 27.93 | 16.95 |
| CDX94970 | Canola | plastid | 26.82 | 16.22 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 26.82 | 15.95 |
| CDY48334 | Canola | vacuole | 27.93 | 15.92 |
| CDX90189 | Canola | extracellular | 27.93 | 15.92 |
| CDY31085 | Canola | plastid | 26.82 | 13.68 |
| CDY32184 | Canola | vacuole | 26.82 | 13.6 |
| CDY47016 | Canola | extracellular | 24.58 | 11.83 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 18.44 | 10.54 |
| CDY43577 | Canola | vacuole | 20.67 | 9.69 |
| CDY37850 | Canola | vacuole | 20.11 | 9.47 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.88 | 8.31 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.88 | 8.23 |
Protein Annotations
| EnsemblPlants:CDX79873 | EnsemblPlantsGene:GSBRNA2T00132724001 | Gene3D:1.20.58.1040 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 |
| PFAM:PF07983 | ProteinID:CDX79873 | ProteinID:CDX79873.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 |
| UniParc:UPI0004EE5F38 | MapMan:35.1 | : | : | : | : |
Description
BnaA05g02830D
Coordinates
chrLK031819:+:668037..669017
Molecular Weight (calculated)
19174.4 Da
IEP (calculated)
5.459
GRAVY (calculated)
-0.089
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGYTPSQFH FHYLLMHLSL VITLTSAQFG GQASETDLWC VAKNNAEDSS LQAAIDWACG PGGTDCAGIQ QGGPCYDPSD IVKTASYVFN SYYLKNGPAD
101: EACNFSNSAA VTSLNPSQGT CKLPSSKRVS NGNIVDATTS TQGTSTQESS DFNRAGRIFS SIWSLPFIIL GLVMINHHF
101: EACNFSNSAA VTSLNPSQGT CKLPSSKRVS NGNIVDATTS TQGTSTQESS DFNRAGRIFS SIWSLPFIIL GLVMINHHF
001: MIMSLPQCSH LRLSILAATA AMLMVITTAQ IGGQVIQVEL WCVAKNNAED SSLQTAIEWA CGQGGADCGP IQQGGPCNDP TDVQKMASFV FNNYYLKNGE
101: EDEACNFNNN AALTSLNPSQ GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL
101: EDEACNFNNN AALTSLNPSQ GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.