Factsheet for GSMUA_Achr10P21630_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G332800.1	Wheat	plasma membrane	56.5	56.18
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	56.5	56.18
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	55.93	55.62
Os06t0537700-01	Rice	extracellular	56.5	53.76
OQU76517	Sorghum	extracellular	52.54	53.45
Zm00001d046155_P001	Maize	extracellular	51.98	52.27
VIT_12s0028g02540.t01	Wine grape	extracellular	48.59	49.43
KRH55823	Soybean	extracellular	47.46	48.28
KRH25694	Soybean	extracellular	44.63	45.66
HORVU0Hr1G021440.2	Barley	plastid	38.42	43.04
Bra003318.1-P	Field mustard	extracellular	41.24	42.94
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.24	42.94
CDY56240	Canola	extracellular	41.24	42.2
KRH27014	Soybean	extracellular	41.24	41.71
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.11	39.66
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	40.11	39.44
CDY70929	Canola	extracellular	40.11	39.44
GSMUA_Achr7P26650_001	Banana	extracellular	25.42	38.79
KRH22312	Soybean	extracellular	39.55	38.25
GSMUA_Achr9P09230_001	Banana	extracellular	25.42	37.19
Solyc07g053430.2.1	Tomato	endoplasmic reticulum, extracellular	46.33	36.44
GSMUA_Achr3P16040_001	Banana	mitochondrion	28.81	36.43
GSMUA_Achr11P...	Banana	extracellular	24.29	36.13
GSMUA_Achr7P07950_001	Banana	extracellular	27.12	36.09
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	27.12	33.57
GSMUA_Achr4P23440_001	Banana	cytosol	28.25	33.33
GSMUA_Achr8P28170_001	Banana	extracellular	28.25	32.26
GSMUA_Achr5P08900_001	Banana	extracellular	34.46	32.11
GSMUA_Achr9P07140_001	Banana	extracellular	32.77	31.18
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	31.64	31.11
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	33.33	30.89
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	32.77	30.21
GSMUA_Achr6P27540_001	Banana	extracellular	31.07	29.89
AT3G58100.2	Thale cress	cytosol	42.37	29.3
GSMUA_Achr9P07170_001	Banana	extracellular	28.25	27.93
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	23.16	27.52
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	33.9	24.69
PGSC0003DMT400024290	Potato	extracellular, vacuole	46.89	23.99
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	23.16	19.9
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	23.73	17.65
GSMUA_Achr6P00220_001	Banana	nucleus	23.16	13.53
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	22.6	11.3
GSMUA_Achr2P02010_001	Banana	cytosol	27.68	10.45
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	28.25	9.49

Protein Annotations

EnsemblPlants:GSMUA_Achr10P21630_001	EnsemblPlants:GSMUA_Achr10T21630_001	EnsemblPlantsGene:GSMUA_Achr10G21630_001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI000295E8AF	UniProt:M0RK88
MapMan:35.1	:	:	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_28.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G21630_001]

Coordinates

chr10:+:27175119..27176339

Molecular Weight (calculated)

18194.3 Da

IEP (calculated)

4.509

GRAVY (calculated)

0.128

Length

177 amino acids

Sequence
(BLAST)

001: MANASFFLLI LLIWSPRGDC LREQAKDAVA TGGELWCVAK NNAEDSALQS ALDWACGPGG ADCRPIQQGG ACYQPEDIQS HASFAFNDYF LRNGLAASAC
101: DFSGTAALTS LNPGQGSCVF PSSSSSRNGS FGGSATSSLG PAASDMSGVS PLRLRTWSLA STVVSLALAT AGGMVLW

Best Arabidopsis Sequence Match ( AT3G58100.2 )
(BLAST)

001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL

Arabidopsis Description

PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.