Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P26650_001 | Banana | extracellular | 36.21 | 75.86 |
GSMUA_Achr9P07140_001 | Banana | extracellular | 46.91 | 61.29 |
KRH54678 | Soybean | extracellular, nucleus | 27.57 | 60.36 |
GSMUA_Achr8P28170_001 | Banana | extracellular | 37.86 | 59.35 |
GSMUA_Achr5P08900_001 | Banana | extracellular | 46.09 | 58.95 |
GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 46.5 | 58.85 |
GSMUA_Achr4P23440_001 | Banana | cytosol | 35.39 | 57.33 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 44.03 | 56.02 |
GSMUA_Achr4P32790_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 39.92 | 53.89 |
KRH03122 | Soybean | extracellular, nucleus | 39.92 | 47.78 |
Solyc03g115200.2.1 | Tomato | extracellular | 36.63 | 47.59 |
PGSC0003DMT400063348 | Potato | extracellular | 36.21 | 47.57 |
VIT_17s0000g07260.t01 | Wine grape | extracellular | 39.51 | 46.38 |
PGSC0003DMT400045877 | Potato | extracellular | 20.16 | 45.79 |
TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.21 | 44.0 |
Os07t0600700-01 | Rice | extracellular | 34.98 | 43.81 |
Zm00001d022059_P001 | Maize | endoplasmic reticulum, extracellular | 35.39 | 43.43 |
TraesCS3A01G302400.1 | Wheat | extracellular | 34.98 | 43.37 |
EER97492 | Sorghum | extracellular | 34.57 | 43.3 |
Zm00001d043361_P001 | Maize | endoplasmic reticulum, extracellular | 33.33 | 43.09 |
TraesCS3D01G299600.1 | Wheat | extracellular | 34.57 | 42.86 |
OQU87600 | Sorghum | extracellular | 32.92 | 42.55 |
TraesCS2D01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 34.57 | 42.42 |
AT1G18650.1 | Thale cress | extracellular | 32.1 | 42.39 |
Zm00001d006776_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 34.57 | 42.21 |
Zm00001d006777_P003 | Maize | endoplasmic reticulum, extracellular, vacuole | 34.57 | 42.21 |
CDX96707 | Canola | extracellular | 32.1 | 42.16 |
CDY19232 | Canola | extracellular | 32.51 | 42.02 |
VIT_01s0011g00570.t01 | Wine grape | extracellular | 33.33 | 41.97 |
CDY26741 | Canola | extracellular | 32.1 | 41.94 |
CDX83826 | Canola | extracellular | 31.69 | 41.85 |
KRG89485 | Soybean | extracellular | 30.04 | 41.48 |
KRH75030 | Soybean | extracellular | 36.63 | 41.4 |
CDY16115 | Canola | extracellular | 26.34 | 41.29 |
Bra035941.1-P | Field mustard | extracellular | 33.74 | 41.21 |
Os01t0763900-01 | Rice | extracellular | 34.98 | 41.06 |
TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 34.57 | 40.98 |
Bra026879.1-P | Field mustard | extracellular | 23.87 | 40.85 |
KRH56823 | Soybean | extracellular | 35.8 | 40.85 |
CDX87201 | Canola | extracellular | 33.33 | 40.7 |
CDY16822 | Canola | extracellular | 33.33 | 40.7 |
KRH70882 | Soybean | extracellular | 36.21 | 40.55 |
Bra026878.1-P | Field mustard | extracellular | 23.46 | 40.43 |
CDY23085 | Canola | extracellular, plasma membrane, vacuole | 32.1 | 40.41 |
Bra029334.1-P | Field mustard | extracellular | 32.1 | 40.0 |
CDY42854 | Canola | extracellular | 32.1 | 40.0 |
KRH50525 | Soybean | extracellular | 30.04 | 39.89 |
CDY02169 | Canola | extracellular | 31.69 | 39.69 |
TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.86 | 39.47 |
Zm00001d047293_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 31.69 | 39.29 |
Bra025116.1-P | Field mustard | extracellular | 25.93 | 39.13 |
EER92116 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 31.69 | 39.09 |
Os03t0421800-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 30.04 | 38.83 |
AT5G61130.1 | Thale cress | extracellular | 32.1 | 38.81 |
CDY16114 | Canola | extracellular | 28.4 | 38.55 |
CDY51213 | Canola | extracellular | 25.51 | 38.51 |
Bra026880.1-P | Field mustard | extracellular | 27.98 | 37.99 |
CDY33795 | Canola | extracellular | 27.98 | 37.99 |
CDY02987 | Canola | extracellular | 25.1 | 37.89 |
TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.86 | 37.88 |
GSMUA_Achr3P16040_001 | Banana | mitochondrion | 21.81 | 37.86 |
PGSC0003DMT400003054 | Potato | extracellular | 29.63 | 37.7 |
TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.45 | 37.56 |
AT2G03505.1 | Thale cress | extracellular | 25.93 | 37.5 |
Zm00001d029539_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 30.86 | 37.5 |
Solyc05g012380.2.1 | Tomato | extracellular | 30.86 | 37.13 |
PGSC0003DMT400072939 | Potato | extracellular | 31.28 | 36.89 |
GSMUA_Achr11P... | Banana | extracellular | 17.7 | 36.13 |
GSMUA_Achr7P07950_001 | Banana | extracellular | 19.75 | 36.09 |
CDY65418 | Canola | cytosol | 21.81 | 36.05 |
Bra016724.1-P | Field mustard | extracellular | 25.51 | 36.05 |
CDX96880 | Canola | extracellular | 25.51 | 36.05 |
Solyc01g010310.2.1 | Tomato | extracellular | 27.98 | 35.98 |
GSMUA_Achr6P27540_001 | Banana | extracellular | 27.16 | 35.87 |
CDX98134 | Canola | extracellular | 27.98 | 35.6 |
CDY34558 | Canola | extracellular | 25.1 | 35.47 |
Bra019700.1-P | Field mustard | extracellular | 28.4 | 35.03 |
AT5G08000.2 | Thale cress | extracellular | 30.45 | 34.74 |
CDY36415 | Canola | extracellular | 27.98 | 34.69 |
Bra012981.1-P | Field mustard | extracellular, vacuole | 31.69 | 34.68 |
Bra009313.1-P | Field mustard | extracellular | 30.04 | 34.43 |
CDX69983 | Canola | extracellular | 30.04 | 34.43 |
Bra004003.1-P | Field mustard | extracellular | 30.86 | 34.4 |
CDY07353 | Canola | extracellular | 30.86 | 34.4 |
Bra012458.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 27.57 | 34.18 |
CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.57 | 34.18 |
HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 29.63 | 34.12 |
CDY04273 | Canola | extracellular | 30.45 | 33.95 |
GSMUA_Achr10P... | Banana | extracellular | 24.69 | 33.9 |
CDY54140 | Canola | extracellular | 28.81 | 33.49 |
TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.81 | 33.49 |
TraesCS1A01G332500.1 | Wheat | extracellular | 28.4 | 33.01 |
GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 19.34 | 32.87 |
TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 37.04 | 32.73 |
CDY65205 | Canola | plasma membrane | 26.34 | 32.32 |
TraesCS1D01G335200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.81 | 32.26 |
CDY50312 | Canola | extracellular | 28.4 | 32.09 |
CDX99038 | Canola | extracellular | 30.86 | 31.91 |
HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 37.86 | 31.62 |
Os05t0512600-01 | Rice | extracellular | 29.22 | 31.14 |
GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 18.93 | 30.87 |
HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 37.45 | 30.64 |
TraesCS5A01G548300.1 | Wheat | plasma membrane | 24.69 | 30.61 |
GSMUA_Achr9P09230_001 | Banana | extracellular | 15.23 | 30.58 |
AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 24.69 | 30.46 |
AT1G69295.1 | Thale cress | extracellular | 27.57 | 30.18 |
CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.22 | 29.96 |
AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 25.93 | 29.86 |
Bra038314.1-P | Field mustard | mitochondrion | 27.16 | 29.2 |
GSMUA_Achr9P07170_001 | Banana | extracellular | 20.99 | 28.49 |
HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 26.34 | 28.32 |
Zm00001d010728_P005 | Maize | extracellular | 25.1 | 27.85 |
EES18492 | Sorghum | extracellular | 24.69 | 26.2 |
Zm00001d038682_P001 | Maize | extracellular | 24.69 | 26.09 |
Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 29.63 | 23.45 |
GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 18.52 | 21.84 |
GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 20.99 | 21.43 |
CDY47016 | Canola | extracellular | 31.69 | 20.7 |
GSMUA_Achr6P00220_001 | Banana | nucleus | 18.11 | 14.52 |
GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane, vacuole | 18.11 | 12.43 |
GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 24.28 | 11.2 |
GSMUA_Achr2P02010_001 | Banana | cytosol | 21.4 | 11.09 |
Protein Annotations
EnsemblPlants:GSMUA_Achr4P10810_001 | EnsemblPlants:GSMUA_Achr4T10810_001 | EnsemblPlantsGene:GSMUA_Achr4G10810_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 | SEG:seg | SMART:SM00768 |
TMHMM:TMhelix | UniParc:UPI000296695D | UniProt:M0SMU8 | MapMan:35.1 | : | : |
Description
Putative uncharacterized protein Sb01g007670 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10810_001]
Coordinates
chr4:-:7831831..7838612
Molecular Weight (calculated)
24912.5 Da
IEP (calculated)
4.968
GRAVY (calculated)
0.304
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTFPDLNHA NIRSDVTATH ASILFFLSPF LFSCHHTLVR QQPLSELTNI CLSSLSMLMA GLLLLLLTVS AFGGSDAAWC VCESDASTTA LQKTLDYACG
101: AGADCNPILQ VGACYDPNTV LAHCSYAANS YYQRNGQAQT ACDFSGTAML TSTDPSANGC VYPATPSAAA TSSTPTSAST TPSSAIPSTF SPLTSNTTNG
201: VLGGIGPSGT TSSLDGSDGG LLRKAGIGSL LTVLLPILVL LKV
101: AGADCNPILQ VGACYDPNTV LAHCSYAANS YYQRNGQAQT ACDFSGTAML TSTDPSANGC VYPATPSAAA TSSTPTSAST TPSSAIPSTF SPLTSNTTNG
201: VLGGIGPSGT TSSLDGSDGG LLRKAGIGSL LTVLLPILVL LKV
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.