Factsheet for TraesCS6A01G110400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	92.89	96.32
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	94.42	93.94
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	67.01	70.21
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	63.45	63.45
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	61.93	62.24
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	60.91	60.0
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.36	56.5
KRH54678	Soybean	extracellular, nucleus	26.4	46.85
GSMUA_Achr9P07140_001	Banana	extracellular	41.12	43.55
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	42.13	43.23
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	41.62	42.93
GSMUA_Achr5P08900_001	Banana	extracellular	40.61	42.11
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	47.72	41.59
CDX83826	Canola	extracellular	38.07	40.76
CDX96707	Canola	extracellular	38.07	40.54
CDY26741	Canola	extracellular	37.56	39.78
TraesCS1A01G332500.1	Wheat	extracellular	42.13	39.71
CDY19232	Canola	extracellular	37.56	39.36
TraesCS3A01G302400.1	Wheat	extracellular	39.09	39.29
PGSC0003DMT400045877	Potato	extracellular	21.32	39.25
Bra026878.1-P	Field mustard	extracellular	27.92	39.01
VIT_17s0000g07260.t01	Wine grape	extracellular	40.1	38.16
KRG89485	Soybean	extracellular	34.01	38.07
GSMUA_Achr8P28170_001	Banana	extracellular	29.95	38.06
CDY16115	Canola	extracellular	29.95	38.06
AT1G18650.1	Thale cress	extracellular	35.53	38.04
Bra026879.1-P	Field mustard	extracellular	27.41	38.03
CDY16114	Canola	extracellular	34.52	37.99
GSMUA_Achr7P26650_001	Banana	extracellular	22.34	37.93
KRH50525	Soybean	extracellular	35.03	37.7
CDY42854	Canola	extracellular	37.06	37.44
Bra026880.1-P	Field mustard	extracellular	34.01	37.43
CDY33795	Canola	extracellular	34.01	37.43
KRH75030	Soybean	extracellular	40.61	37.21
Bra029334.1-P	Field mustard	extracellular	36.55	36.92
KRH70882	Soybean	extracellular	40.61	36.87
VIT_01s0011g00570.t01	Wine grape	extracellular	36.04	36.79
CDY51213	Canola	extracellular	29.95	36.65
Bra025116.1-P	Field mustard	extracellular	29.95	36.65
Solyc03g115200.2.1	Tomato	extracellular	34.52	36.36
CDY23085	Canola	extracellular, plasma membrane, vacuole	35.03	35.75
PGSC0003DMT400003054	Potato	extracellular	34.52	35.6
CDY34558	Canola	extracellular	30.96	35.47
PGSC0003DMT400072939	Potato	extracellular	37.06	35.44
CDY02987	Canola	extracellular	28.93	35.4
CDY65418	Canola	cytosol	26.4	35.37
CDY16822	Canola	extracellular	35.53	35.18
CDX87201	Canola	extracellular	35.53	35.18
PGSC0003DMT400063348	Potato	extracellular	32.99	35.14
CDX98134	Canola	extracellular	34.01	35.08
Bra016724.1-P	Field mustard	extracellular	30.46	34.88
CDX96880	Canola	extracellular	30.46	34.88
TraesCS5A01G393200.1	Wheat	extracellular	29.44	34.73
Bra035941.1-P	Field mustard	extracellular	35.03	34.67
CDY02169	Canola	extracellular	34.01	34.54
AT2G03505.1	Thale cress	extracellular	29.44	34.52
Bra019700.1-P	Field mustard	extracellular	34.52	34.52
KRH03122	Soybean	extracellular, nucleus	35.53	34.48
AT1G69295.1	Thale cress	extracellular	38.58	34.23
Solyc05g012380.2.1	Tomato	extracellular	35.03	34.16
Solyc01g010310.2.1	Tomato	extracellular	32.49	33.86
CDY36415	Canola	extracellular	33.5	33.67
CDY04273	Canola	extracellular	37.06	33.49
Bra004003.1-P	Field mustard	extracellular	37.06	33.49
CDY07353	Canola	extracellular	37.06	33.49
AT5G61130.1	Thale cress	extracellular	34.01	33.33
CDY54140	Canola	extracellular	33.5	31.58
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	28.43	31.46
KRH56823	Soybean	extracellular	34.01	31.46
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.06	30.8
CDY50312	Canola	extracellular	33.5	30.7
Bra009313.1-P	Field mustard	extracellular	32.99	30.66
CDX69983	Canola	extracellular	32.99	30.66
AT5G08000.2	Thale cress	extracellular	32.99	30.52
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	37.56	30.45
Bra012981.1-P	Field mustard	extracellular, vacuole	34.01	30.18
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	29.95	30.1
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	29.95	30.1
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	29.44	29.44
CDY65205	Canola	plasma membrane	29.44	29.29
TraesCS5A01G456400.1	Wheat	extracellular, plasma membrane	26.9	29.12
CDX99038	Canola	extracellular	32.99	27.66
Bra038314.1-P	Field mustard	mitochondrion	31.47	27.43
TraesCS5A01G390800.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	18.78	26.62
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	28.43	26.54
TraesCS5A01G548300.1	Wheat	plasma membrane	25.38	25.51
TraesCS2A01G252300.1	Wheat	extracellular	20.3	23.12
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.95	21.93
Solyc04g005420.2.1	Tomato	extracellular, vacuole	31.47	20.2
CDY47016	Canola	extracellular	36.04	19.09
TraesCS3A01G227300.1	Wheat	extracellular	30.96	18.32
TraesCS7A01G481700.1	Wheat	extracellular	18.78	16.89
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	24.87	14.85
TraesCS2A01G425000.1	Wheat	plastid	23.86	13.02
TraesCS4A01G358500.1	Wheat	extracellular	25.38	12.2
TraesCS5A01G365000.1	Wheat	extracellular	20.81	8.86

Protein Annotations

EnsemblPlants:TraesCS6A01G110400.1	EnsemblPlantsGene:TraesCS6A01G110400	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6A:+:79671908..79673532

Molecular Weight (calculated)

19188.3 Da

IEP (calculated)

4.176

GRAVY (calculated)

0.337

Length

197 amino acids

Sequence
(BLAST)

001: MEAALVLVVA VLLGSSALVA SDFCVCRSEQ PTAVLQKAID YACGQGADCT AIAQSGACYS PDEVASHCSW AANSYFQKFR SSGATCDFTG AATLSSTDPS
101: FSGCTFPSSA SAAGTATGTG TATTGTGTTT GTGTATTGTG TTTAGTFSPG MGTGFNSTGF SPTTGSMDGT AAAAGLLPSM RLAASIAVLL LSYLALP

Best Arabidopsis Sequence Match ( AT1G69295.1 )
(BLAST)

001: MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI

Arabidopsis Description

PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.