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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH54678 Soybean extracellular, nucleus 48.28 88.29
KRH56823 Soybean extracellular 86.7 82.63
VIT_17s0000g07260.t01 Wine grape extracellular 66.5 65.22
Solyc03g115200.2.1 Tomato extracellular 58.62 63.64
PGSC0003DMT400063348 Potato extracellular 57.14 62.7
GSMUA_Achr4P23440_001 Banana cytosol 40.89 55.33
CDX83826 Canola extracellular 48.77 53.8
AT1G18650.1 Thale cress extracellular 48.77 53.8
CDY19232 Canola extracellular 49.26 53.19
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 50.25 53.12
CDX96707 Canola extracellular 48.28 52.97
CDY26741 Canola extracellular 48.28 52.69
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 44.83 50.56
GSMUA_Achr9P07140_001 Banana extracellular 46.31 50.54
GSMUA_Achr7P26650_001 Banana extracellular 28.08 49.14
KRH75030 Soybean extracellular 51.72 48.84
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 45.32 48.17
KRH70882 Soybean extracellular 51.23 47.93
KRG89485 Soybean extracellular 41.38 47.73
GSMUA_Achr5P08900_001 Banana extracellular 44.34 47.37
KRH50525 Soybean extracellular 41.87 46.45
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.34 45.45
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.84 44.5
EER97492 Sorghum extracellular 41.87 43.81
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.84 43.41
GSMUA_Achr8P28170_001 Banana extracellular 33.0 43.23
Os03t0756300-01 Rice extracellular 36.45 42.29
Os07t0600700-01 Rice extracellular 40.39 42.27
TraesCS5B01G399400.1 Wheat extracellular 32.51 41.77
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.89 41.71
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 40.89 41.71
TraesCS5B01G398000.1 Wheat extracellular 33.5 41.46
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 40.39 41.41
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 37.93 40.96
KRH14105 Soybean extracellular 23.65 40.68
KRH74013 Soybean extracellular 23.65 40.68
KRH42801 Soybean extracellular 38.42 40.62
TraesCS5A01G393200.1 Wheat extracellular 33.0 40.12
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 47.78 39.92
TraesCS5D01G403000.1 Wheat extracellular 32.51 39.76
KRH58889 Soybean endoplasmic reticulum, extracellular 36.95 39.27
OQU87600 Sorghum extracellular 35.96 38.83
TraesCS3D01G299600.1 Wheat extracellular 36.95 38.27
TraesCS3A01G302400.1 Wheat extracellular 36.95 38.27
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.47 37.89
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 34.98 37.77
Os01t0763900-01 Rice extracellular 38.42 37.68
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 38.92 37.44
KRH51177 Soybean extracellular 21.18 37.07
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 37.93 36.84
TraesCS1A01G332500.1 Wheat extracellular 37.93 36.84
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.92 36.41
Os05t0512600-01 Rice extracellular 40.89 36.4
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.98 35.86
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.48 35.71
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 34.48 35.53
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.48 35.53
KRH58890 Soybean extracellular 25.12 35.42
EES18492 Sorghum extracellular 39.41 34.93
HORVU4Hr1G028360.1 Barley peroxisome, plastid 21.67 34.92
KRH31583 Soybean extracellular 33.0 34.9
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.5 34.0
Zm00001d010728_P005 Maize extracellular 36.45 33.79
Zm00001d038682_P001 Maize extracellular 36.95 32.61
KRH55823 Soybean extracellular 26.6 31.03
HORVU2Hr1G033470.1 Barley cytosol, plastid 44.83 30.64
KRH25694 Soybean extracellular 26.11 30.64
Zm00001d013250_P003 Maize extracellular 33.5 30.36
KRH59215 Soybean extracellular 26.11 29.28
TraesCS5A01G548300.1 Wheat plasma membrane 27.59 28.57
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 33.99 28.28
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 37.93 28.0
KXG37528 Sorghum mitochondrion 34.98 26.79
HORVU3Hr1G074010.3 Barley cytosol, plastid 37.44 26.12
KRH27014 Soybean extracellular 21.67 25.14
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 27.09 24.34
HORVU5Hr1G096090.6 Barley plastid 27.59 23.93
KRH22312 Soybean extracellular 21.18 23.5
KRH42964 Soybean extracellular 31.53 23.19
KRH59086 Soybean cytosol, mitochondrion, nucleus 28.08 23.08
KRH59084 Soybean extracellular 28.08 22.71
KRH73630 Soybean extracellular 26.6 20.93
KRH14480 Soybean extracellular 26.11 20.62
KRG98922 Soybean extracellular 25.12 19.92
KRH46050 Soybean extracellular 24.63 19.53
KRH12824 Soybean extracellular, vacuole 31.03 19.44
KRH37784 Soybean extracellular 31.03 19.33
KRH43685 Soybean plastid 21.67 17.74
KRG90034 Soybean extracellular, plasma membrane 24.14 16.55
KRH13771 Soybean vacuole 25.12 14.21
KRH77114 Soybean extracellular, vacuole 23.15 11.9
KRH28365 Soybean vacuole 23.15 11.81
KRH33760 Soybean vacuole 32.51 10.8
KRG90471 Soybean vacuole 32.02 10.69
KRG96680 Soybean extracellular 27.09 10.4
KRH68400 Soybean extracellular 27.09 10.22
Protein Annotations
EntrezGene:100797001MapMan:35.1EMBL:ACUP02010335EMBL:BT099308UniProt:C6TNI5EnsemblPlantsGene:GLYMA_17G077900
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658
EnsemblPlants:KRH03122ProteinID:KRH03122ProteinID:KRH03122.1PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF147
SMART:SM00768SignalP:SignalP-noTMUniParc:UPI0001B17048InterPro:X8SEG:seg:
Description
hypothetical protein
Coordinates
chr17:+:6080171..6084506
Molecular Weight (calculated)
20203.7 Da
IEP (calculated)
6.041
GRAVY (calculated)
0.091
Length
203 amino acids
Sequence
(BLAST)
001: MAALALALLL LAFTGTSSAT WCVCKDGSDA ILQKTLDYAC GAGADCNPLH QNGPCFQPNT VRAHCNYAVN SYFQRKGQAQ GSCDFAGTAI VTASDPSSGG
101: TCVYPSSVSA AGTGTTPVTT TPTMGTTPTT GTPSTSTGTG TGTGTGTTPY STTPGVLGGI GSGMGPSGSG MNDESHGGIG LVHSSSFFSM ALFSAFMMML
201: CWG
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.