Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 39.74 | 73.81 |
TraesCS5B01G398000.1 | Wheat | extracellular | 46.15 | 65.85 |
TraesCS5B01G399400.1 | Wheat | extracellular | 44.02 | 65.19 |
TraesCS5D01G403000.1 | Wheat | extracellular | 45.3 | 63.86 |
TraesCS5A01G393200.1 | Wheat | extracellular | 45.3 | 63.47 |
KRH54678 | Soybean | extracellular, nucleus | 23.08 | 48.65 |
Os03t0756300-01 | Rice | extracellular | 35.9 | 48.0 |
Zm00001d034062_P001 | Maize | cytosol, golgi, peroxisome | 46.15 | 44.26 |
Zm00001d013250_P003 | Maize | extracellular | 40.17 | 41.96 |
KXG37528 | Sorghum | mitochondrion | 46.15 | 40.75 |
PGSC0003DMT400045877 | Potato | extracellular | 17.52 | 38.32 |
GSMUA_Achr4P32790_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 28.21 | 36.67 |
Bra026878.1-P | Field mustard | extracellular | 21.79 | 36.17 |
CDY26741 | Canola | extracellular | 26.5 | 33.33 |
CDY16115 | Canola | extracellular | 21.79 | 32.9 |
CDY19232 | Canola | extracellular | 26.07 | 32.45 |
Bra026879.1-P | Field mustard | extracellular | 19.66 | 32.39 |
CDY51213 | Canola | extracellular | 22.22 | 32.3 |
AT1G18650.1 | Thale cress | extracellular | 25.21 | 32.07 |
Bra025116.1-P | Field mustard | extracellular | 21.79 | 31.68 |
CDY02987 | Canola | extracellular | 21.37 | 31.06 |
CDX83826 | Canola | extracellular | 24.36 | 30.98 |
CDY02169 | Canola | extracellular | 25.64 | 30.93 |
PGSC0003DMT400063348 | Potato | extracellular | 24.36 | 30.81 |
CDX87201 | Canola | extracellular | 26.07 | 30.65 |
CDY16822 | Canola | extracellular | 26.07 | 30.65 |
Bra035941.1-P | Field mustard | extracellular | 26.07 | 30.65 |
CDY65418 | Canola | cytosol | 19.23 | 30.61 |
CDY23085 | Canola | extracellular, plasma membrane, vacuole | 25.21 | 30.57 |
Solyc03g115200.2.1 | Tomato | extracellular | 24.36 | 30.48 |
AT2G03505.1 | Thale cress | extracellular | 21.79 | 30.36 |
CDX96707 | Canola | extracellular | 23.93 | 30.27 |
CDY42854 | Canola | extracellular | 25.21 | 30.26 |
Bra029334.1-P | Field mustard | extracellular | 25.21 | 30.26 |
KRG89485 | Soybean | extracellular | 22.65 | 30.11 |
KRH50525 | Soybean | extracellular | 23.08 | 29.51 |
AT5G61130.1 | Thale cress | extracellular | 25.21 | 29.35 |
VIT_01s0011g00570.t01 | Wine grape | extracellular | 23.08 | 27.98 |
KRH03122 | Soybean | extracellular, nucleus | 23.93 | 27.59 |
VIT_17s0000g07260.t01 | Wine grape | extracellular | 24.36 | 27.54 |
Bra012981.1-P | Field mustard | extracellular, vacuole | 26.07 | 27.48 |
KRH75030 | Soybean | extracellular | 24.79 | 26.98 |
CDX69983 | Canola | extracellular | 24.36 | 26.89 |
Bra009313.1-P | Field mustard | extracellular | 24.36 | 26.89 |
AT5G08000.2 | Thale cress | extracellular | 24.36 | 26.76 |
HORVU0Hr1G021440.2 | Barley | plastid | 17.95 | 26.58 |
HORVU5Hr1G095450.3 | Barley | extracellular | 14.96 | 26.32 |
CDY33795 | Canola | extracellular | 20.09 | 26.26 |
Bra026880.1-P | Field mustard | extracellular | 20.09 | 26.26 |
CDY16114 | Canola | extracellular | 20.09 | 26.26 |
PGSC0003DMT400003054 | Potato | extracellular | 21.37 | 26.18 |
CDX96880 | Canola | extracellular | 19.23 | 26.16 |
Bra016724.1-P | Field mustard | extracellular | 19.23 | 26.16 |
Solyc01g010310.2.1 | Tomato | extracellular | 20.94 | 25.93 |
KRH70882 | Soybean | extracellular | 23.93 | 25.81 |
CDY34558 | Canola | extracellular | 18.8 | 25.58 |
CDY65205 | Canola | plasma membrane | 21.37 | 25.25 |
Solyc05g012380.2.1 | Tomato | extracellular | 21.79 | 25.25 |
Bra012458.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 20.94 | 25.0 |
CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 20.94 | 25.0 |
CDX98134 | Canola | extracellular | 20.09 | 24.61 |
PGSC0003DMT400072939 | Potato | extracellular | 21.37 | 24.27 |
CDY36415 | Canola | extracellular | 20.09 | 23.98 |
HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 23.08 | 23.89 |
Bra019700.1-P | Field mustard | extracellular | 20.09 | 23.86 |
CDX99038 | Canola | extracellular | 23.93 | 23.83 |
HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 20.94 | 23.22 |
KRH56823 | Soybean | extracellular | 20.94 | 23.0 |
AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 19.23 | 22.84 |
HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 27.78 | 22.34 |
AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 19.23 | 21.33 |
HORVU5Hr1G089770.2 | Barley | plastid | 17.52 | 21.24 |
CDY04273 | Canola | extracellular | 19.23 | 20.64 |
Bra004003.1-P | Field mustard | extracellular | 18.8 | 20.18 |
CDY07353 | Canola | extracellular | 18.8 | 20.18 |
HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 25.21 | 19.87 |
HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 22.65 | 19.78 |
CDY54140 | Canola | extracellular | 17.52 | 19.62 |
HORVU2Hr1G099430.1 | Barley | plastid | 18.8 | 19.13 |
CDY50312 | Canola | extracellular | 17.52 | 19.07 |
HORVU1Hr1G091830.4 | Barley | extracellular | 21.37 | 18.94 |
AT1G69295.1 | Thale cress | extracellular | 17.95 | 18.92 |
CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 18.8 | 18.57 |
HORVU7Hr1G108980.1 | Barley | extracellular | 17.09 | 17.94 |
Bra038314.1-P | Field mustard | mitochondrion | 17.09 | 17.7 |
Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 22.22 | 16.94 |
CDY47016 | Canola | extracellular | 25.21 | 15.86 |
HORVU3Hr1G056800.1 | Barley | extracellular | 20.51 | 13.52 |
HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 23.08 | 13.01 |
Protein Annotations
EnsemblPlants:HORVU5Hr1G096090.6 | EnsemblPlantsGene:HORVU5Hr1G096090 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | PFAM:PF07983 |
SEG:seg | SMART:SM00768 | UniParc:UPI000B481F1F | UniProt:A0A287SDS9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:-:600493382..600495517
Molecular Weight (calculated)
25020.6 Da
IEP (calculated)
8.367
GRAVY (calculated)
-0.179
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: TPCFRSSSES SPICFADLTQ AKRAPPHRAN SNSSTHPLSP ALKHAPRPAG QATHARTHAP RLRSDATTTH TPSKQARNPL RPSPSMAPHA ARRLLLLLAL
101: AAALAARSDG AWCVCRADLP DAALQRTLDY ACGSAADCKP IQPSAACFAP DTVKAHCSYA VNSFYQRSGQ NPLACVFSGT AVLSTVDPSA NGCKYPATAT
201: PRYDAMHHLV ADLLHCFAEF IFLAFFLEEI DNDI
101: AAALAARSDG AWCVCRADLP DAALQRTLDY ACGSAADCKP IQPSAACFAP DTVKAHCSYA VNSFYQRSGQ NPLACVFSGT AVLSTVDPSA NGCKYPATAT
201: PRYDAMHHLV ADLLHCFAEF IFLAFFLEEI DNDI
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.