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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G028360.1 Barley peroxisome, plastid 39.74 73.81
TraesCS5B01G398000.1 Wheat extracellular 46.15 65.85
TraesCS5B01G399400.1 Wheat extracellular 44.02 65.19
TraesCS5D01G403000.1 Wheat extracellular 45.3 63.86
TraesCS5A01G393200.1 Wheat extracellular 45.3 63.47
KRH54678 Soybean extracellular, nucleus 23.08 48.65
Os03t0756300-01 Rice extracellular 35.9 48.0
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 46.15 44.26
Zm00001d013250_P003 Maize extracellular 40.17 41.96
KXG37528 Sorghum mitochondrion 46.15 40.75
PGSC0003DMT400045877 Potato extracellular 17.52 38.32
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 28.21 36.67
Bra026878.1-P Field mustard extracellular 21.79 36.17
CDY26741 Canola extracellular 26.5 33.33
CDY16115 Canola extracellular 21.79 32.9
CDY19232 Canola extracellular 26.07 32.45
Bra026879.1-P Field mustard extracellular 19.66 32.39
CDY51213 Canola extracellular 22.22 32.3
AT1G18650.1 Thale cress extracellular 25.21 32.07
Bra025116.1-P Field mustard extracellular 21.79 31.68
CDY02987 Canola extracellular 21.37 31.06
CDX83826 Canola extracellular 24.36 30.98
CDY02169 Canola extracellular 25.64 30.93
PGSC0003DMT400063348 Potato extracellular 24.36 30.81
CDX87201 Canola extracellular 26.07 30.65
CDY16822 Canola extracellular 26.07 30.65
Bra035941.1-P Field mustard extracellular 26.07 30.65
CDY65418 Canola cytosol 19.23 30.61
CDY23085 Canola extracellular, plasma membrane, vacuole 25.21 30.57
Solyc03g115200.2.1 Tomato extracellular 24.36 30.48
AT2G03505.1 Thale cress extracellular 21.79 30.36
CDX96707 Canola extracellular 23.93 30.27
CDY42854 Canola extracellular 25.21 30.26
Bra029334.1-P Field mustard extracellular 25.21 30.26
KRG89485 Soybean extracellular 22.65 30.11
KRH50525 Soybean extracellular 23.08 29.51
AT5G61130.1 Thale cress extracellular 25.21 29.35
VIT_01s0011g00570.t01 Wine grape extracellular 23.08 27.98
KRH03122 Soybean extracellular, nucleus 23.93 27.59
VIT_17s0000g07260.t01 Wine grape extracellular 24.36 27.54
Bra012981.1-P Field mustard extracellular, vacuole 26.07 27.48
KRH75030 Soybean extracellular 24.79 26.98
CDX69983 Canola extracellular 24.36 26.89
Bra009313.1-P Field mustard extracellular 24.36 26.89
AT5G08000.2 Thale cress extracellular 24.36 26.76
HORVU0Hr1G021440.2 Barley plastid 17.95 26.58
HORVU5Hr1G095450.3 Barley extracellular 14.96 26.32
CDY33795 Canola extracellular 20.09 26.26
Bra026880.1-P Field mustard extracellular 20.09 26.26
CDY16114 Canola extracellular 20.09 26.26
PGSC0003DMT400003054 Potato extracellular 21.37 26.18
CDX96880 Canola extracellular 19.23 26.16
Bra016724.1-P Field mustard extracellular 19.23 26.16
Solyc01g010310.2.1 Tomato extracellular 20.94 25.93
KRH70882 Soybean extracellular 23.93 25.81
CDY34558 Canola extracellular 18.8 25.58
CDY65205 Canola plasma membrane 21.37 25.25
Solyc05g012380.2.1 Tomato extracellular 21.79 25.25
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 20.94 25.0
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 20.94 25.0
CDX98134 Canola extracellular 20.09 24.61
PGSC0003DMT400072939 Potato extracellular 21.37 24.27
CDY36415 Canola extracellular 20.09 23.98
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 23.08 23.89
Bra019700.1-P Field mustard extracellular 20.09 23.86
CDX99038 Canola extracellular 23.93 23.83
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 20.94 23.22
KRH56823 Soybean extracellular 20.94 23.0
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 19.23 22.84
HORVU3Hr1G074010.3 Barley cytosol, plastid 27.78 22.34
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 19.23 21.33
HORVU5Hr1G089770.2 Barley plastid 17.52 21.24
CDY04273 Canola extracellular 19.23 20.64
Bra004003.1-P Field mustard extracellular 18.8 20.18
CDY07353 Canola extracellular 18.8 20.18
HORVU2Hr1G033470.1 Barley cytosol, plastid 25.21 19.87
HORVU5Hr1G109550.1 Barley cytosol, plastid 22.65 19.78
CDY54140 Canola extracellular 17.52 19.62
HORVU2Hr1G099430.1 Barley plastid 18.8 19.13
CDY50312 Canola extracellular 17.52 19.07
HORVU1Hr1G091830.4 Barley extracellular 21.37 18.94
AT1G69295.1 Thale cress extracellular 17.95 18.92
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 18.8 18.57
HORVU7Hr1G108980.1 Barley extracellular 17.09 17.94
Bra038314.1-P Field mustard mitochondrion 17.09 17.7
Solyc04g005420.2.1 Tomato extracellular, vacuole 22.22 16.94
CDY47016 Canola extracellular 25.21 15.86
HORVU3Hr1G056800.1 Barley extracellular 20.51 13.52
HORVU5Hr1G117440.1 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 23.08 13.01
Protein Annotations
EnsemblPlants:HORVU5Hr1G096090.6EnsemblPlantsGene:HORVU5Hr1G096090InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237PFAM:PF07983
SEG:segSMART:SM00768UniParc:UPI000B481F1FUniProt:A0A287SDS9MapMan:35.1:
Description
No Description!
Coordinates
chrchr5H:-:600493382..600495517
Molecular Weight (calculated)
25020.6 Da
IEP (calculated)
8.367
GRAVY (calculated)
-0.179
Length
234 amino acids
Sequence
(BLAST)
001: TPCFRSSSES SPICFADLTQ AKRAPPHRAN SNSSTHPLSP ALKHAPRPAG QATHARTHAP RLRSDATTTH TPSKQARNPL RPSPSMAPHA ARRLLLLLAL
101: AAALAARSDG AWCVCRADLP DAALQRTLDY ACGSAADCKP IQPSAACFAP DTVKAHCSYA VNSFYQRSGQ NPLACVFSGT AVLSTVDPSA NGCKYPATAT
201: PRYDAMHHLV ADLLHCFAEF IFLAFFLEEI DNDI
Best Arabidopsis Sequence Match ( AT1G18650.2 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.