Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G513400.1 | Wheat | extracellular | 84.58 | 86.24 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 81.69 | 83.09 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 81.93 | 82.93 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 50.6 | 42.77 |
| Os03t0833600-01 | Rice | plasma membrane | 57.35 | 41.46 |
| EER90586 | Sorghum | extracellular | 53.25 | 35.94 |
| Zm00001d012917_P001 | Maize | plasma membrane | 51.57 | 34.91 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 28.92 | 33.15 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 23.61 | 32.56 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 23.13 | 32.54 |
| CDX94970 | Canola | plastid | 23.13 | 32.43 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 23.86 | 32.25 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 28.19 | 31.88 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 9.88 | 30.83 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 24.1 | 30.3 |
| HORVU0Hr1G021440.2 | Barley | plastid | 11.33 | 29.75 |
| HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 8.92 | 29.37 |
| CDY31085 | Canola | plastid | 24.82 | 29.34 |
| CDY32184 | Canola | vacuole | 24.34 | 28.61 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 18.07 | 28.41 |
| HORVU5Hr1G089770.2 | Barley | plastid | 13.01 | 27.98 |
| HORVU2Hr1G099430.1 | Barley | plastid | 14.46 | 26.09 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 13.98 | 26.01 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 35.18 | 23.74 |
| HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 12.77 | 23.45 |
| HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 11.81 | 23.22 |
| HORVU5Hr1G096090.6 | Barley | plastid | 13.01 | 23.08 |
| KRG96680 | Soybean | extracellular | 26.75 | 20.98 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 23.61 | 20.9 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 26.51 | 20.87 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 13.25 | 20.52 |
| KRG90471 | Soybean | vacuole | 29.4 | 20.07 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 17.11 | 20.0 |
| KRH33760 | Soybean | vacuole | 29.4 | 19.97 |
| HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 13.73 | 19.59 |
| KRH68400 | Soybean | extracellular | 25.3 | 19.52 |
| HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 13.25 | 18.52 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G117440.1 | EnsemblPlantsGene:HORVU5Hr1G117440 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:X8 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 |
| TMHMM:TMhelix | UniParc:UPI000B47CE89 | UniProt:A0A287SVT1 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:650720525..650724389
Molecular Weight (calculated)
41160.6 Da
IEP (calculated)
7.879
GRAVY (calculated)
0.074
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: FQLRSLHSLV SKHSILPSPL PIAPSMAAPA LCFVLCMLLL CHGSTQAGKT VPGVTVAAGA KDGSMGTERF MGPAVDVSSN SRRRRELLGG TRETTTRDVF
101: APVTNPVTVP ATNPASSGGI VTVPATNPGT GTGFATNPNL PPLYPEPSTM PAPFSNPVAA PTMPAPFTAP VTNPATTPTA TPGTSPITNP ATTYPGGSAG
201: AGVGVGSVPT TPVYQAPATT VQPAAGGTGQ STWCVAKAGV TEAALQDGLD FACGMGGADC SALQPMGSCY NPNTIQAHAS YAFNAYYQRS PSPASCDFGG
301: AGMLVATNPS SGACMYQTST GSSSGAVTGT TAGPVGVTPS FGPVGTTTGT GPAVGSGVSG STVLNANTYP GGTSMYGPGN PTGFSDSGSG AASLNCSWVL
401: SLIWIFTFAY VKMKV
101: APVTNPVTVP ATNPASSGGI VTVPATNPGT GTGFATNPNL PPLYPEPSTM PAPFSNPVAA PTMPAPFTAP VTNPATTPTA TPGTSPITNP ATTYPGGSAG
201: AGVGVGSVPT TPVYQAPATT VQPAAGGTGQ STWCVAKAGV TEAALQDGLD FACGMGGADC SALQPMGSCY NPNTIQAHAS YAFNAYYQRS PSPASCDFGG
301: AGMLVATNPS SGACMYQTST GSSSGAVTGT TAGPVGVTPS FGPVGTTTGT GPAVGSGVSG STVLNANTYP GGTSMYGPGN PTGFSDSGSG AASLNCSWVL
401: SLIWIFTFAY VKMKV
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.