Factsheet for HORVU6Hr1G019780.4

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.59	49.47
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.92	48.99
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.59	47.72
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	38.5	46.28
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	38.5	44.39
KRH54678	Soybean	extracellular, nucleus	21.68	44.14
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	38.05	43.0
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	36.73	42.13
PGSC0003DMT400045877	Potato	extracellular	19.47	41.12
GSMUA_Achr8P28170_001	Banana	extracellular	25.22	36.77
KRG89485	Soybean	extracellular	28.32	36.36
GSMUA_Achr7P26650_001	Banana	extracellular	18.58	36.21
CDY16115	Canola	extracellular	24.78	36.13
GSMUA_Achr9P07140_001	Banana	extracellular	29.65	36.02
Bra026879.1-P	Field mustard	extracellular	22.57	35.92
KRH50525	Soybean	extracellular	28.76	35.52
Bra026878.1-P	Field mustard	extracellular	22.12	35.46
CDY42854	Canola	extracellular	30.53	35.38
PGSC0003DMT400003054	Potato	extracellular	29.65	35.08
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	19.47	34.92
Bra029334.1-P	Field mustard	extracellular	30.09	34.87
CDY19232	Canola	extracellular	28.76	34.57
CDY26741	Canola	extracellular	28.32	34.41
CDX96707	Canola	extracellular	27.88	34.05
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	28.76	34.03
AT1G18650.1	Thale cress	extracellular	27.43	33.7
CDX83826	Canola	extracellular	27.43	33.7
GSMUA_Achr5P08900_001	Banana	extracellular	28.32	33.68
CDY23085	Canola	extracellular, plasma membrane, vacuole	28.76	33.68
CDY51213	Canola	extracellular	23.89	33.54
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	28.32	33.33
CDY33795	Canola	extracellular	26.11	32.96
Bra026880.1-P	Field mustard	extracellular	26.11	32.96
Bra025116.1-P	Field mustard	extracellular	23.45	32.92
AT2G03505.1	Thale cress	extracellular	24.34	32.74
CDY65418	Canola	cytosol	21.24	32.65
CDY16114	Canola	extracellular	25.66	32.4
CDY02987	Canola	extracellular	23.01	32.3
Solyc01g010310.2.1	Tomato	extracellular	26.99	32.28
CDX87201	Canola	extracellular	28.32	32.16
Bra035941.1-P	Field mustard	extracellular	28.32	32.16
CDY16822	Canola	extracellular	28.32	32.16
CDY04273	Canola	extracellular	30.97	32.11
PGSC0003DMT400072939	Potato	extracellular	29.2	32.04
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	27.88	31.98
CDY34558	Canola	extracellular	24.34	31.98
CDY02169	Canola	extracellular	27.43	31.96
Bra004003.1-P	Field mustard	extracellular	30.53	31.65
CDY07353	Canola	extracellular	30.53	31.65
CDY54140	Canola	extracellular	29.2	31.58
Bra016724.1-P	Field mustard	extracellular	23.89	31.4
CDX96880	Canola	extracellular	23.89	31.4
Solyc05g012380.2.1	Tomato	extracellular	27.88	31.19
KRH75030	Soybean	extracellular	29.65	31.16
VIT_01s0011g00570.t01	Wine grape	extracellular	26.55	31.09
VIT_17s0000g07260.t01	Wine grape	extracellular	28.32	30.92
PGSC0003DMT400063348	Potato	extracellular	25.22	30.81
CDY50312	Canola	extracellular	29.2	30.7
Solyc03g115200.2.1	Tomato	extracellular	25.22	30.48
Bra019700.1-P	Field mustard	extracellular	26.55	30.46
KRH70882	Soybean	extracellular	29.2	30.41
AT1G69295.1	Thale cress	extracellular	29.65	30.18
AT5G08000.2	Thale cress	extracellular	28.32	30.05
AT5G61130.1	Thale cress	extracellular	26.55	29.85
CDX98134	Canola	extracellular	25.22	29.84
CDY36415	Canola	extracellular	25.66	29.59
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	25.66	29.59
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	25.66	29.59
CDY65205	Canola	plasma membrane	25.66	29.29
CDX69983	Canola	extracellular	27.43	29.25
Bra009313.1-P	Field mustard	extracellular	27.43	29.25
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	26.55	28.44
Bra012981.1-P	Field mustard	extracellular, vacuole	27.88	28.38
Bra038314.1-P	Field mustard	mitochondrion	28.32	28.32
KRH03122	Soybean	extracellular, nucleus	24.34	27.09
HORVU5Hr1G095450.3	Barley	extracellular	15.93	27.07
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.32	27.0
HORVU2Hr1G033470.1	Barley	cytosol, plastid	35.4	26.94
CDX99038	Canola	extracellular	27.88	26.81
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	28.32	26.34
KRH56823	Soybean	extracellular	23.89	25.35
HORVU0Hr1G021440.2	Barley	plastid	16.37	23.42
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	21.68	23.22
HORVU5Hr1G096090.6	Barley	plastid	23.89	23.08
HORVU5Hr1G089770.2	Barley	plastid	18.58	21.76
HORVU1Hr1G091830.4	Barley	extracellular	24.78	21.21
HORVU3Hr1G074010.3	Barley	cytosol, plastid	26.99	20.96
HORVU2Hr1G099430.1	Barley	plastid	21.24	20.87
HORVU5Hr1G109550.1	Barley	cytosol, plastid	23.45	19.78
HORVU7Hr1G108980.1	Barley	extracellular	19.03	19.28
Solyc04g005420.2.1	Tomato	extracellular, vacuole	25.66	18.89
CDY47016	Canola	extracellular	30.53	18.55
HORVU3Hr1G056800.1	Barley	extracellular	24.78	15.77
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	23.45	12.77

Protein Annotations

EnsemblPlants:HORVU6Hr1G019780.4	EnsemblPlantsGene:HORVU6Hr1G019780	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI000B480947	UniProt:A0A287TI43	MapMan:35.1

Description

No Description!

Coordinates

chrchr6H:+:54341715..54343721

Molecular Weight (calculated)

24560.7 Da

IEP (calculated)

8.303

GRAVY (calculated)

-0.485

Length

226 amino acids

Sequence
(BLAST)

001: MEAALVLVAA AALLLSPALV ASDFCVCRSD QPTAVLQKAI DYACGQGADC TAIEQSGACY SPDEVAAHCS WAANSYFQKF RSSGATCDFT GAATLSTTDP
101: SFSGCTFPSS ARCRRHHHRN RRHHYGNRDD HHGHRDDHGG HLQPRDGHRV QQHRAQRHRV QPGDREHGRH RRGSRLASVD ETGGLHRHPP PLLLGTTMKS
201: VCLSFLMAGT HQLASVALWS GVLEAS

Best Arabidopsis Sequence Match ( AT1G18650.2 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.