Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 79.17 | 96.31 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 91.67 | 89.96 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 88.26 | 87.59 |
| EES20007 | Sorghum | extracellular, vacuole | 65.15 | 69.64 |
| Zm00001d009686_P002 | Maize | extracellular | 62.88 | 67.76 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 59.85 | 61.0 |
| Os05t0581900-01 | Rice | extracellular | 63.26 | 59.43 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 28.03 | 49.66 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 38.64 | 42.5 |
| KRG98922 | Soybean | extracellular | 38.64 | 39.84 |
| PGSC0003DMT400044716 | Potato | extracellular | 36.74 | 39.75 |
| Solyc07g056310.2.1 | Tomato | extracellular | 37.12 | 39.68 |
| KRH46050 | Soybean | extracellular | 37.5 | 38.67 |
| KRH14480 | Soybean | extracellular | 35.98 | 36.97 |
| KRH73630 | Soybean | extracellular | 35.98 | 36.82 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 26.89 | 36.41 |
| HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 16.29 | 34.13 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 16.67 | 33.08 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 29.55 | 32.77 |
| AT2G30933.1 | Thale cress | extracellular | 28.03 | 32.6 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 30.3 | 32.39 |
| CDX97778 | Canola | extracellular | 28.03 | 32.31 |
| CDY29629 | Canola | extracellular | 28.03 | 32.31 |
| KRH59084 | Soybean | extracellular | 30.68 | 32.27 |
| KRH42964 | Soybean | extracellular | 33.71 | 32.25 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 41.67 | 30.99 |
| HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 23.11 | 28.91 |
| CDY43335 | Canola | extracellular | 31.82 | 28.47 |
| Bra010831.1-P | Field mustard | nucleus | 31.06 | 28.47 |
| Solyc02g071200.2.1 | Tomato | extracellular | 31.82 | 27.72 |
| HORVU5Hr1G089770.2 | Barley | plastid | 20.08 | 27.46 |
| KRH37784 | Soybean | extracellular | 33.71 | 27.3 |
| CDX99818 | Canola | extracellular | 30.3 | 27.12 |
| KRH12824 | Soybean | extracellular, vacuole | 32.95 | 26.85 |
| CDY48334 | Canola | vacuole | 31.44 | 26.43 |
| CDX90189 | Canola | extracellular | 31.44 | 26.43 |
| AT1G29380.1 | Thale cress | extracellular | 31.06 | 26.03 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 21.97 | 26.01 |
| Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 29.55 | 25.83 |
| HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 21.21 | 24.78 |
| HORVU0Hr1G021440.2 | Barley | plastid | 14.39 | 24.05 |
| HORVU2Hr1G099430.1 | Barley | plastid | 20.45 | 23.48 |
| HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 25.76 | 23.37 |
| Bra032314.1-P | Field mustard | plastid | 31.82 | 22.16 |
| HORVU5Hr1G096090.6 | Barley | plastid | 18.94 | 21.37 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 21.59 | 21.27 |
| HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 21.97 | 19.53 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 28.41 | 18.07 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G091830.4 | EnsemblPlantsGene:HORVU1Hr1G091830 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | UniParc:UPI000B478516 | UniProt:A0A287GQV5 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr1H:-:549053178..549054629
Molecular Weight (calculated)
26733.6 Da
IEP (calculated)
6.318
GRAVY (calculated)
0.027
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLGTVHHCL ASLLVLLLLR CCHVGGVEQR ERAAVVRLER ARDMPERDVT TPLATVPLVN PTPMPEATAA PTLAHPTAAA GXGGAGSWCV ASPSAGAAAL
101: QVALDYACGQ GADCSPIQPG GSCADPDTVR DHASYAFNSY YQKNPVQTSC DFAGAAILTS TDPSTTTCKY PSTSTGASVL NTTNPLTPVT PTYGSPPGGY
201: YNSPPGPGGY YNSPPLYGSM SPPDYGGSIS AATAMMPGSK STTVACTSLT CLLVVATVSL NLCK
101: QVALDYACGQ GADCSPIQPG GSCADPDTVR DHASYAFNSY YQKNPVQTSC DFAGAAILTS TDPSTTTCKY PSTSTGASVL NTTNPLTPVT PTYGSPPGGY
201: YNSPPGPGGY YNSPPLYGSM SPPDYGGSIS AATAMMPGSK STTVACTSLT CLLVVATVSL NLCK
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.