Factsheet for VIT_10s0003g02720.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	35.9	46.98
KRH59086	Soybean	cytosol, mitochondrion, nucleus	53.33	42.11
KRH42964	Soybean	extracellular	58.97	41.67
KRH59084	Soybean	extracellular	52.31	40.64
VIT_12s0057g00700.t01	Wine grape	extracellular	23.59	39.32
VIT_12s0028g00050.t01	Wine grape	extracellular	46.15	37.5
Solyc02g071200.2.1	Tomato	extracellular	53.85	34.65
KRH12824	Soybean	extracellular, vacuole	55.9	33.64
KRH37784	Soybean	extracellular	54.87	32.82
CDY43335	Canola	extracellular	49.23	32.54
EES20007	Sorghum	extracellular, vacuole	41.03	32.39
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	35.9	32.26
CDX90189	Canola	extracellular	50.77	31.53
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	37.95	31.09
CDX99818	Canola	extracellular	46.67	30.85
Zm00001d009686_P002	Maize	extracellular	38.46	30.61
CDY48334	Canola	vacuole	49.23	30.57
Bra010831.1-P	Field mustard	nucleus	45.13	30.56
Os01t0631500-01	Rice	extracellular	42.56	29.75
AT1G29380.1	Thale cress	extracellular	47.18	29.21
VIT_12s0028g02540.t01	Wine grape	extracellular	25.64	28.74
VIT_01s0011g00570.t01	Wine grape	extracellular	27.69	27.98
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	36.92	27.8
HORVU1Hr1G091830.4	Barley	extracellular	36.41	26.89
VIT_05s0029g00190.t01	Wine grape	extracellular	30.26	26.82
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	36.41	26.69
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.41	26.39
Os05t0581900-01	Rice	extracellular	37.95	26.33
Zm00001d011431_P001	Maize	plasma membrane	41.54	26.21
Bra032314.1-P	Field mustard	plastid	50.77	26.12
VIT_10s0003g04340.t01	Wine grape	plasma membrane	27.18	25.6
EES01128	Sorghum	extracellular	40.51	25.48
VIT_17s0000g07260.t01	Wine grape	extracellular	26.67	25.12
TraesCS3A01G227300.1	Wheat	extracellular	41.03	24.02
TraesCS3B01G257100.1	Wheat	extracellular	41.03	23.46
HORVU3Hr1G056800.1	Barley	extracellular	41.03	22.54
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	26.15	20.16
VIT_14s0060g00440.t01	Wine grape	vacuole	46.15	14.63
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	25.64	13.59
VIT_07s0129g00230.t01	Wine grape	vacuole	28.21	13.32
VIT_09s0002g06500.t01	Wine grape	cytosol, peroxisome, plastid	11.28	5.96

Protein Annotations

EntrezGene:100255498	wikigene:100255498	MapMan:35.1	ProteinID:CBI30817	ProteinID:CBI30817.3	UniProt:D7TJZ5
EMBL:FN595992	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	EntrezGene:LOC100255498	wikigene:LOC100255498	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
SMART:SM00768	UniParc:UPI0001BE3963	ArrayExpress:VIT_10s0003g02720	EnsemblPlantsGene:VIT_10s0003g02720	EnsemblPlants:VIT_10s0003g02720.t01	InterPro:X8
RefSeq:XP_002271903	RefSeq:XP_002271903.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:4782784..4784077

Molecular Weight (calculated)

19765.8 Da

IEP (calculated)

4.010

GRAVY (calculated)

-0.036

Length

195 amino acids

Sequence
(BLAST)

001: MPTTTPTATP TTPTMPTTTP TTPTTTTPAA STGSWCIASP AASETALQVA IDYACGYGGA DCSAIQSSGS CYNPNTLRDH ASYAFNDYYQ KNPAPTSCVF
101: GGTAQLSYTD PSSANCRYAA TSTSASVTPV TPATPATPMT PTGSTPTDIP SGSTVYGSEP TATPTLSLAV SMSSSSLLLF TATCFLVSLL TANYV

Best Arabidopsis Sequence Match ( AT1G29380.1 )
(BLAST)

001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF
301: TAVGILMPLL RENYL

Arabidopsis Description

Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.