Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G257100.1 | Wheat | extracellular | 94.29 | 92.08 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 92.19 | 86.48 |
| Os01t0631500-01 | Rice | extracellular | 57.96 | 69.18 |
| EES01128 | Sorghum | extracellular | 61.56 | 66.13 |
| Zm00001d011431_P001 | Maize | plasma membrane | 60.66 | 65.37 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 23.42 | 52.35 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 24.02 | 41.03 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.43 | 40.15 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 27.93 | 38.75 |
| Bra010831.1-P | Field mustard | nucleus | 33.33 | 38.54 |
| PGSC0003DMT400044716 | Potato | extracellular | 27.33 | 37.3 |
| AT1G29380.1 | Thale cress | extracellular | 34.83 | 36.83 |
| CDX99818 | Canola | extracellular | 32.43 | 36.61 |
| Solyc07g056310.2.1 | Tomato | extracellular | 26.73 | 36.03 |
| CDY48334 | Canola | vacuole | 33.63 | 35.67 |
| KRH42964 | Soybean | extracellular | 29.13 | 35.14 |
| KRH14480 | Soybean | extracellular | 26.43 | 34.24 |
| KRH73630 | Soybean | extracellular | 26.43 | 34.11 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 25.23 | 34.01 |
| CDX90189 | Canola | extracellular | 31.83 | 33.76 |
| KRG98922 | Soybean | extracellular | 25.83 | 33.59 |
| CDY43335 | Canola | extracellular | 29.43 | 33.22 |
| KRH46050 | Soybean | extracellular | 25.53 | 33.2 |
| KRH59084 | Soybean | extracellular | 24.92 | 33.07 |
| KRH12824 | Soybean | extracellular, vacuole | 31.83 | 32.72 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 19.22 | 32.65 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 16.82 | 32.37 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 23.12 | 32.35 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 16.22 | 32.34 |
| KRH37784 | Soybean | extracellular | 31.53 | 32.21 |
| Solyc02g071200.2.1 | Tomato | extracellular | 28.83 | 31.68 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 18.62 | 31.63 |
| CDX97778 | Canola | extracellular | 21.62 | 31.44 |
| CDY29629 | Canola | extracellular | 21.62 | 31.44 |
| Bra032314.1-P | Field mustard | plastid | 35.74 | 31.4 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 17.12 | 31.32 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 18.32 | 30.96 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 18.32 | 30.5 |
| AT2G30933.1 | Thale cress | extracellular | 20.12 | 29.52 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 18.32 | 29.19 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 12.01 | 28.78 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 14.11 | 26.4 |
| Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 22.82 | 25.17 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 14.71 | 22.37 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 20.72 | 20.91 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 22.52 | 18.29 |
| TraesCS2A01G425000.1 | Wheat | plastid | 17.72 | 16.34 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 15.32 | 11.02 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G227300.1 | EnsemblPlantsGene:TraesCS3A01G227300 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3A:-:425147009..425148519
Molecular Weight (calculated)
32171.5 Da
IEP (calculated)
4.747
GRAVY (calculated)
-0.071
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFLRPSNC IAYLLLLLAF CCCGTEQRRV EASNRLTQHP RILTTVSVMK PSYPTITTPT SASYAMPASS RFPSLADAND GGDVGGGGIG GGGAAGGATG
101: GGGTTGGGVG GGGATGGGAV GGVGGGGAAG GIGGGGGGGG GGTWCVASQS ASTSALQVAL DYACGYSGVD CSAIQTGGSC FNPDTIHDHA SYAFNSYYQK
201: NPLPTSCDFG GTATITTTDP SSGSCQYPAS SGGAQGTMPP PSPTTLTPTT PMTPTPMTPF TPTPMTPDTP STGTPMYGSN SPPDFGSMSP PGPGSNSPPD
301: YSDVGGAPAT AMGRATLALV SILAATLSMS LAT
101: GGGTTGGGVG GGGATGGGAV GGVGGGGAAG GIGGGGGGGG GGTWCVASQS ASTSALQVAL DYACGYSGVD CSAIQTGGSC FNPDTIHDHA SYAFNSYYQK
201: NPLPTSCDFG GTATITTTDP SSGSCQYPAS SGGAQGTMPP PSPTTLTPTT PMTPTPMTPF TPTPMTPDTP STGTPMYGSN SPPDFGSMSP PGPGSNSPPD
301: YSDVGGAPAT AMGRATLALV SILAATLSMS LAT
001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVRY VFLFPQINFL TCQKSEKNNC D
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVRY VFLFPQINFL TCQKSEKNNC D
Arabidopsis Description
Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.