Factsheet for Bra010831.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
plastid 1
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43335	Canola	extracellular	86.46	84.41
CDX90189	Canola	extracellular	91.32	83.76
AT1G29380.1	Thale cress	extracellular	79.17	72.38
Bra032314.1-P	Field mustard	plastid	89.24	67.81
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	25.35	48.99
VIT_10s0003g02720.t01	Wine grape	plastid	30.56	45.13
Bra035382.1-P	Field mustard	extracellular	17.71	42.86
Bra034233.1-P	Field mustard	cytosol	15.97	41.82
KRH42964	Soybean	extracellular	38.54	40.22
KRH59086	Soybean	cytosol, mitochondrion, nucleus	33.33	38.87
KRH59084	Soybean	extracellular	33.33	38.25
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	27.78	36.87
Solyc02g071200.2.1	Tomato	extracellular	38.19	36.3
Os01t0631500-01	Rice	extracellular	34.03	35.13
KRH37784	Soybean	extracellular	39.24	34.66
KRH12824	Soybean	extracellular, vacuole	38.54	34.26
Zm00001d011431_P001	Maize	plasma membrane	36.46	33.98
EES01128	Sorghum	extracellular	36.46	33.87
TraesCS3A01G227300.1	Wheat	extracellular	38.54	33.33
EES20007	Sorghum	extracellular, vacuole	28.47	33.2
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	27.08	32.77
TraesCS3B01G257100.1	Wheat	extracellular	38.19	32.26
Zm00001d009686_P002	Maize	extracellular	27.08	31.84
HORVU3Hr1G056800.1	Barley	extracellular	38.54	31.27
HORVU1Hr1G091830.4	Barley	extracellular	28.47	31.06
Os05t0581900-01	Rice	extracellular	30.21	30.96
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	28.12	30.11
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	27.78	30.08
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	25.69	28.57
Bra003318.1-P	Field mustard	extracellular	16.67	28.24
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	28.47	27.8
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	29.51	27.69
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	18.75	27.55
Bra004003.1-P	Field mustard	extracellular	20.14	26.61
Bra026880.1-P	Field mustard	extracellular	16.32	26.26
Bra026878.1-P	Field mustard	extracellular	12.85	26.24
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	15.97	25.56
Bra026879.1-P	Field mustard	extracellular	12.5	25.35
Bra025116.1-P	Field mustard	extracellular	13.89	24.84
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	17.71	24.64
Bra016724.1-P	Field mustard	extracellular	14.58	24.42
Bra038314.1-P	Field mustard	mitochondrion	19.1	24.34
Bra035941.1-P	Field mustard	extracellular	16.67	24.12
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	25.0	23.84
Bra019700.1-P	Field mustard	extracellular	15.97	23.35
Bra009313.1-P	Field mustard	extracellular	17.01	23.11
Bra029334.1-P	Field mustard	extracellular	15.28	22.56
Bra012981.1-P	Field mustard	extracellular, vacuole	15.62	20.27
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	21.53	19.2
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	22.22	16.37
Bra031835.1-P	Field mustard	vacuole	21.53	16.36

Protein Annotations

EnsemblPlants:Bra010831.1	EnsemblPlants:Bra010831.1-P	EnsemblPlantsGene:Bra010831	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SMART:SM00768	UniParc:UPI00025454A8	UniProt:M4D2X8	MapMan:35.1

Description

AT1G29380 (E=7e-047) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30933.2); Has 72661 Blast hits to 25630 proteins in 1396 species: Archae - 121; Bacteria - 23698; Metazoa - 22516; Fungi - 4473; Plants - 9059; Viruses - 967; Other Eukaryotes - 11827 (source: NCBI BLink).

Coordinates

chrA08:-:16684141..16686328

Molecular Weight (calculated)

27250.1 Da

IEP (calculated)

3.957

GRAVY (calculated)

-0.382

Length

288 amino acids

Sequence
(BLAST)

001: MIGLVSALDV IAQGGQGDIP VVNPTSPGGD TTTPTITQPS PPSSTFPGPV TNPNPPTGGY PPLDGTTPTG GGYPPLDGTT PTGGGGYPPL DGTTPTGGGA
101: PGGGGGDAGT GAGGGGGGAP GGGGGGGDTG GGGGGGGGSG QWCIAKANAS PTALQVALDY ACGYGGADCG QIQQGASCYE PNTIRDHASF AFNSYYQKHP
201: GSDSCNFGGA AQLTSTDPSK GSCRFSASSG TVSTSPPSQP SPPDFNSPPS TSTFPPPITT PTTGMPGSGP PFGVAEPTGL PRNLALVL

Best Arabidopsis Sequence Match ( AT1G29380.1 )
(BLAST)

001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF
301: TAVGILMPLL RENYL

Arabidopsis Description

Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.