Factsheet for Bra034233.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56715	Canola	cytosol	82.73	80.53
CDY21992	Canola	cytosol	92.73	71.83
CDY48582	Canola	cytosol	92.73	71.83
PGSC0003DMT400059279	Potato	cytosol	60.0	55.46
AT4G05430.3	Thale cress	extracellular, plasma membrane	82.73	54.17
GSMUA_Achr7P07950_001	Banana	extracellular	55.45	45.86
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	50.91	39.16
KRH59215	Soybean	extracellular	60.91	37.02
Solyc04g058080.2.1	Tomato	extracellular	59.09	36.52
OQU88437	Sorghum	extracellular	54.55	34.09
Zm00001d007864_P001	Maize	extracellular	54.55	33.9
TraesCS2B01G272100.1	Wheat	extracellular	52.73	33.53
TraesCS2A01G252300.1	Wheat	extracellular	52.73	33.53
TraesCS2D01G253000.1	Wheat	extracellular	52.73	33.53
Bra035382.1-P	Field mustard	extracellular	35.45	32.77
VIT_10s0003g04340.t01	Wine grape	plasma membrane	59.09	31.4
Bra003318.1-P	Field mustard	extracellular	34.55	22.35
Bra026878.1-P	Field mustard	extracellular	27.27	21.28
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	34.55	21.11
Bra026879.1-P	Field mustard	extracellular	26.36	20.42
Bra025116.1-P	Field mustard	extracellular	27.27	18.63
Bra016724.1-P	Field mustard	extracellular	28.18	18.02
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	33.64	17.87
Bra035941.1-P	Field mustard	extracellular	30.91	17.09
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	44.55	16.61
Bra009313.1-P	Field mustard	extracellular	31.82	16.51
Bra026880.1-P	Field mustard	extracellular	26.36	16.2
Bra010831.1-P	Field mustard	nucleus	41.82	15.97
Bra029334.1-P	Field mustard	extracellular	28.18	15.9
Bra019700.1-P	Field mustard	extracellular	28.18	15.74
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	41.82	14.98
Bra012981.1-P	Field mustard	extracellular, vacuole	30.0	14.86
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.36	14.8
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	39.09	14.24
Bra004003.1-P	Field mustard	extracellular	28.18	14.22
Bra038314.1-P	Field mustard	mitochondrion	29.09	14.16
Bra032314.1-P	Field mustard	plastid	41.82	12.14
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	34.55	11.76
Bra031835.1-P	Field mustard	vacuole	38.18	11.08
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	35.45	9.97

Protein Annotations

EnsemblPlants:Bra034233.1	EnsemblPlants:Bra034233.1-P	EnsemblPlantsGene:Bra034233	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98
PFAM:PF07983	SMART:SM00768	UniParc:UPI0002543823	UniProt:M4EZJ0	MapMan:35.1	:

Description

AT4G05430 (E=2e-051) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-related (TAIR:AT1G09460.1); Has 776 Blast hits to 740 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 770; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

Coordinates

chrA01:+:26820877..26821209

Molecular Weight (calculated)

12175.3 Da

IEP (calculated)

7.244

GRAVY (calculated)

-0.321

Length

110 amino acids

Sequence
(BLAST)

001: MIRPESPIRP EGNTTFLDGT TWCVARPSAS QAELQRALDW ACGIGRVDCS VIEKHGDCYE PDTIWSHASF AFNAYYQTNG NNRIACYFGG TATLTKINPS
101: KFLAPSRVLQ

Best Arabidopsis Sequence Match ( AT4G05430.2 )
(BLAST)

001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSK

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.