Factsheet for Bra021679.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29629	Canola	extracellular	75.83	100.0
CDX97778	Canola	extracellular	73.51	96.94
AT2G30933.1	Thale cress	extracellular	59.6	79.3
Bra035382.1-P	Field mustard	extracellular	17.22	43.7
Bra034233.1-P	Field mustard	cytosol	14.24	39.09
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	23.84	33.18
EES20007	Sorghum	extracellular, vacuole	24.17	29.55
HORVU1Hr1G091830.4	Barley	extracellular	25.83	29.55
Zm00001d009686_P002	Maize	extracellular	23.84	29.39
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	26.16	29.37
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	25.17	28.57
Bra025116.1-P	Field mustard	extracellular	15.23	28.57
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	18.21	28.06
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	27.15	27.8
Os05t0581900-01	Rice	extracellular	25.83	27.76
Bra016724.1-P	Field mustard	extracellular	15.56	27.33
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	16.23	27.22
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	23.18	27.03
Bra004003.1-P	Field mustard	extracellular	19.21	26.61
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	18.21	26.57
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	26.82	26.38
Bra026878.1-P	Field mustard	extracellular	12.25	26.24
Os01t0631500-01	Rice	extracellular	24.17	26.16
Bra026879.1-P	Field mustard	extracellular	12.25	26.06
Bra003318.1-P	Field mustard	extracellular	14.24	25.29
Bra038314.1-P	Field mustard	mitochondrion	18.87	25.22
Bra010831.1-P	Field mustard	nucleus	23.84	25.0
Bra035941.1-P	Field mustard	extracellular	16.23	24.62
Bra026880.1-P	Field mustard	extracellular	14.57	24.58
Bra019700.1-P	Field mustard	extracellular	15.56	23.86
Zm00001d011431_P001	Maize	plasma membrane	24.17	23.62
EES01128	Sorghum	extracellular	23.84	23.23
Bra009313.1-P	Field mustard	extracellular	16.23	23.11
TraesCS3A01G227300.1	Wheat	extracellular	25.17	22.82
TraesCS3B01G257100.1	Wheat	extracellular	25.17	22.29
Bra029334.1-P	Field mustard	extracellular	13.91	21.54
HORVU3Hr1G056800.1	Barley	extracellular	24.83	21.13
Bra032314.1-P	Field mustard	plastid	25.17	20.05
Bra012981.1-P	Field mustard	extracellular, vacuole	14.24	19.37
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	16.23	15.17
Bra031835.1-P	Field mustard	vacuole	18.54	14.78
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	17.55	13.55

Protein Annotations

EnsemblPlants:Bra021679.1	EnsemblPlants:Bra021679.1-P	EnsemblPlantsGene:Bra021679	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI00025449A1	UniProt:M4DYT3
MapMan:35.1	:	:	:	:	:

Description

AT2G30933 (E=2e-068) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29380.1); Has 799 Blast hits to 763 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 23; Plants - 773; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

Coordinates

chrA04:-:13822870..13826747

Molecular Weight (calculated)

32566.4 Da

IEP (calculated)

7.174

GRAVY (calculated)

-0.144

Length

302 amino acids

Sequence
(BLAST)

001: MGKGFRIVTS LLLLFFVFPG AKASTQPIEE EKDITTPLAT NPTTSEPTVV PNSDSDASAV VTTPLTVPTP PRVAAHPGES WCVARENAPK IALQAALDYA
101: CGIGGADCSE IQEGGKCYNP NSLIAHASFA FNSYYQKNPI PSSCNFGGSA VTISGDPSVG SCHFPSTRYR SLENRLLSNN NNTRICEMMT MLECDNCSTN
201: ESTLNVSEDG LGLFGRIPSH PTPKPEASSS SSRTFSHLYF HSHLLCFLFL YHVPVVEVSA CHGAAARCSI RSISNSSNVL GRNFSPLLFK NMKQRFSSFY
301: TS

Best Arabidopsis Sequence Match ( AT2G30933.1 )
(BLAST)

001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.