Factsheet for Bra032314.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	extracellular
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48334	Canola	vacuole	81.53	98.41
CDX99818	Canola	extracellular	75.73	97.29
Bra010831.1-P	Field mustard	nucleus	67.81	89.24
VIT_10s0003g02720.t01	Wine grape	plastid	26.12	50.77
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	19.53	49.66
Bra035382.1-P	Field mustard	extracellular	14.25	45.38
KRH42964	Soybean	extracellular	32.72	44.93
KRH59086	Soybean	cytosol, mitochondrion, nucleus	28.23	43.32
KRH59084	Soybean	extracellular	28.5	43.03
Bra034233.1-P	Field mustard	cytosol	12.14	41.82
Solyc02g071200.2.1	Tomato	extracellular	31.93	39.93
KRH12824	Soybean	extracellular, vacuole	34.04	39.81
KRH37784	Soybean	extracellular	34.04	39.57
EES01128	Sorghum	extracellular	29.55	36.13
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	20.58	35.94
Os01t0631500-01	Rice	extracellular	26.39	35.84
TraesCS3A01G227300.1	Wheat	extracellular	31.4	35.74
Zm00001d011431_P001	Maize	plasma membrane	29.02	35.6
EES20007	Sorghum	extracellular, vacuole	22.96	35.22
Zm00001d009686_P002	Maize	extracellular	22.43	34.69
TraesCS3B01G257100.1	Wheat	extracellular	30.87	34.31
HORVU3Hr1G056800.1	Barley	extracellular	31.13	33.24
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	20.84	33.19
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	21.9	32.05
HORVU1Hr1G091830.4	Barley	extracellular	22.16	31.82
Os05t0581900-01	Rice	extracellular	23.22	31.32
Bra026878.1-P	Field mustard	extracellular	11.61	31.21
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	21.9	31.2
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	21.64	30.48
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	23.48	30.17
Bra003318.1-P	Field mustard	extracellular	13.46	30.0
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	24.27	29.97
Bra026880.1-P	Field mustard	extracellular	13.98	29.61
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	15.3	29.59
Bra004003.1-P	Field mustard	extracellular	16.89	29.36
Bra016724.1-P	Field mustard	extracellular	13.19	29.07
Bra026879.1-P	Field mustard	extracellular	10.82	28.87
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	13.19	27.78
Bra029334.1-P	Field mustard	extracellular	14.25	27.69
Bra019700.1-P	Field mustard	extracellular	14.25	27.41
Bra025116.1-P	Field mustard	extracellular	11.61	27.33
Bra035941.1-P	Field mustard	extracellular	14.25	27.14
Bra009313.1-P	Field mustard	extracellular	14.78	26.42
Bra038314.1-P	Field mustard	mitochondrion	15.04	25.22
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.05	25.17
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	13.72	25.12
Bra012981.1-P	Field mustard	extracellular, vacuole	14.51	24.77
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	16.36	19.2
Bra031835.1-P	Field mustard	vacuole	17.15	17.15
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	17.68	17.14

Protein Annotations

EnsemblPlants:Bra032314.1	EnsemblPlants:Bra032314.1-P	EnsemblPlantsGene:Bra032314	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SMART:SM00768	UniParc:UPI000254269C	UniProt:M4EU32	MapMan:35.1

Description

AT1G29380 (E=2e-058) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30933.2); Has 72661 Blast hits to 25630 proteins in 1396 species: Archae - 121; Bacteria - 23698; Metazoa - 22516; Fungi - 4473; Plants - 9059; Viruses - 967; Other Eukaryotes - 11827 (source: NCBI BLink).

Coordinates

chrA09:-:22605936..22607634

Molecular Weight (calculated)

37368.3 Da

IEP (calculated)

4.719

GRAVY (calculated)

-0.309

Length

379 amino acids

Sequence
(BLAST)

001: MILLFSSSLY LRDGTSSQPF YLPSPTSQDY LTSLSLSKAS TNKERKEMPH RIAPRCFQIM LLCLLITSPL DVIIAQGGQG DIPVVNPTSP GGDTTTPTIT
101: QPSPPSSTFP GPVTNPNPPT GGYPPLDGTT PPTGGGYPPL DGTTPTGGYP PLDGTTPPGG GGGGAPGGGG DTGAGGGGGA PGGGGGGDTG AGGGGAPGGG
201: GGGGGGGGGQ WCIAKATASP TSLQVALDYA CGYGGADCGQ IQQGASCYEP NTIRDHASFA FNSYYQKHPG SDSCNFGGAA QLTSADPSKG SCRFPSSSGT
301: VSTSPPSQPS PPDFNSPPST PTYPPPITTP TTDIPGSGPP YGVAEPTGLP SLATHVSHSF LSVFTAVGIL VPLLRQNYL

Best Arabidopsis Sequence Match ( AT1G29380.1 )
(BLAST)

001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF
301: TAVGILMPLL RENYL

Arabidopsis Description

Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.