Factsheet for GSMUA_Achr3P31190_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	79.19	49.58
GSMUA_Achr7P07950_001	Banana	extracellular	34.23	38.35
VIT_12s0028g00050.t01	Wine grape	extracellular	60.4	37.5
VIT_10s0003g02720.t01	Wine grape	plastid	46.98	35.9
PGSC0003DMT400044716	Potato	extracellular	57.72	35.25
Solyc07g056310.2.1	Tomato	extracellular	58.39	35.22
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	49.66	34.1
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	32.21	33.57
EES20007	Sorghum	extracellular, vacuole	54.36	32.79
Zm00001d009686_P002	Maize	extracellular	53.69	32.65
KRH14480	Soybean	extracellular	55.7	32.3
KRH73630	Soybean	extracellular	55.7	32.17
GSMUA_Achr11P...	Banana	extracellular	25.5	31.93
GSMUA_Achr7P26650_001	Banana	extracellular	24.83	31.9
KRG98922	Soybean	extracellular	53.69	31.25
KRH46050	Soybean	extracellular	53.02	30.86
GSMUA_Achr9P09230_001	Banana	extracellular	24.83	30.58
Os01t0631500-01	Rice	extracellular	55.03	29.39
KRH42964	Soybean	extracellular	54.36	29.35
GSMUA_Achr3P16040_001	Banana	mitochondrion	27.52	29.29
KRH59086	Soybean	cytosol, mitochondrion, nucleus	46.98	28.34
HORVU1Hr1G091830.4	Barley	extracellular	49.66	28.03
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	49.66	27.82
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	48.32	27.8
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.66	27.51
KRH59084	Soybean	extracellular	45.64	27.09
Os05t0581900-01	Rice	extracellular	50.34	26.69
GSMUA_Achr4P23440_001	Banana	cytosol	26.17	26.0
Zm00001d011431_P001	Maize	plasma membrane	53.69	25.89
GSMUA_Achr8P28170_001	Banana	extracellular	26.85	25.81
EES01128	Sorghum	extracellular	53.69	25.81
Solyc02g071200.2.1	Tomato	extracellular	52.35	25.74
Bra010831.1-P	Field mustard	nucleus	48.99	25.35
KRH12824	Soybean	extracellular, vacuole	55.03	25.31
KRH37784	Soybean	extracellular	53.69	24.54
CDY43335	Canola	extracellular	48.32	24.41
CDX99818	Canola	extracellular	48.32	24.41
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	33.56	24.27
CDY48334	Canola	vacuole	49.66	23.57
TraesCS3A01G227300.1	Wheat	extracellular	52.35	23.42
GSMUA_Achr10P...	Banana	extracellular	27.52	23.16
CDX90189	Canola	extracellular	48.32	22.93
TraesCS3B01G257100.1	Wheat	extracellular	52.35	22.87
GSMUA_Achr6P27540_001	Banana	extracellular	28.19	22.83
GSMUA_Achr5P08900_001	Banana	extracellular	28.86	22.63
HORVU3Hr1G056800.1	Barley	extracellular	53.02	22.25
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	26.85	22.22
GSMUA_Achr9P07140_001	Banana	extracellular	27.52	22.04
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	28.19	21.99
GSMUA_Achr9P07170_001	Banana	extracellular	25.5	21.23
AT1G29380.1	Thale cress	extracellular	43.62	20.63
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	26.17	20.31
Bra032314.1-P	Field mustard	plastid	49.66	19.53
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	30.87	18.93
GSMUA_Achr2P02010_001	Banana	cytosol	54.36	17.27
GSMUA_Achr6P00220_001	Banana	nucleus	34.9	17.16
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	53.02	14.99
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	34.23	14.41

Protein Annotations

EnsemblPlants:GSMUA_Achr3P31190_001	EnsemblPlants:GSMUA_Achr3T31190_001	EnsemblPlantsGene:GSMUA_Achr3G31190_001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SMART:SM00768	UniParc:UPI00029531F5	UniProt:M0SJD3	MapMan:35.1

Description

X8 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G31190_001]

Coordinates

chr3:-:29607195..29607644

Molecular Weight (calculated)

15602.9 Da

IEP (calculated)

3.503

GRAVY (calculated)

-0.239

Length

149 amino acids

Sequence
(BLAST)

001: MQTDVSSMPE MDVVTPVTTV PVINPSTTPT TTTPVYDPFT APPTPIMTPT TNPYSTPSMV TPSTPSSGQS WCVASQTASQ TALQVALDYA CGYGGADCSA
101: IQQGGSCFDP DTVRDHASYA FNDYYQKNPI PTSCDFGGTA VIVNADPSE

Best Arabidopsis Sequence Match ( AT2G30933.1 )
(BLAST)

001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.