Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 62.47 | 55.6 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 17.27 | 54.36 |
| GSMUA_Achr7P07950_001 | Banana | extracellular | 12.79 | 45.11 |
| GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 12.15 | 39.86 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 9.59 | 37.19 |
| GSMUA_Achr7P26650_001 | Banana | extracellular | 8.96 | 36.21 |
| GSMUA_Achr11P... | Banana | extracellular | 8.96 | 35.29 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 17.27 | 34.03 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 9.59 | 32.14 |
| GSMUA_Achr8P28170_001 | Banana | extracellular | 10.23 | 30.97 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 21.75 | 30.91 |
| TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 21.32 | 30.3 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 21.32 | 30.3 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 13.22 | 30.1 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 18.98 | 28.99 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 18.55 | 28.9 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 20.9 | 28.74 |
| KXG27714 | Sorghum | vacuole | 21.11 | 28.7 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 17.7 | 28.14 |
| CDX94970 | Canola | plastid | 17.7 | 28.04 |
| GSMUA_Achr10P... | Banana | extracellular | 10.45 | 27.68 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 19.4 | 27.58 |
| GSMUA_Achr4P23440_001 | Banana | cytosol | 8.74 | 27.33 |
| GSMUA_Achr5P08900_001 | Banana | extracellular | 10.87 | 26.84 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 10.45 | 26.63 |
| GSMUA_Achr9P07140_001 | Banana | extracellular | 10.45 | 26.34 |
| CDY31085 | Canola | plastid | 19.62 | 26.21 |
| CDY32184 | Canola | vacuole | 19.62 | 26.06 |
| GSMUA_Achr6P00220_001 | Banana | nucleus | 16.63 | 25.74 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 10.45 | 25.65 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 9.59 | 25.14 |
| TraesCS5D01G513400.1 | Wheat | extracellular | 21.75 | 25.06 |
| GSMUA_Achr4P32790_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 9.59 | 25.0 |
| GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 10.23 | 25.0 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 21.54 | 24.75 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 18.98 | 24.59 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 21.32 | 24.39 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 18.76 | 23.98 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 20.9 | 23.61 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 23.03 | 22.0 |
| GSMUA_Achr4P10810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 11.09 | 21.4 |
| GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane, vacuole | 15.14 | 20.06 |
| Os03t0833600-01 | Rice | plasma membrane | 23.88 | 19.51 |
| KRG96680 | Soybean | extracellular | 21.75 | 19.28 |
| KRH68400 | Soybean | extracellular | 21.75 | 18.96 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 24.31 | 18.54 |
| KRH33760 | Soybean | vacuole | 24.09 | 18.49 |
| Zm00001d012917_P001 | Maize | plasma membrane | 24.09 | 18.43 |
| EER90586 | Sorghum | extracellular | 24.09 | 18.37 |
| KRG90471 | Soybean | vacuole | 23.67 | 18.26 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P02010_001 | EnsemblPlants:GSMUA_Achr2T02010_001 | EnsemblPlantsGene:GSMUA_Achr2G02010_001 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 |
| PFAM:PF07983 | PRINTS:PR01217 | SEG:seg | SMART:SM00768 | UniParc:UPI0002961B00 | UniProt:M0S4E2 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_60.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G02010_001]
Coordinates
chr2:-:7850345..7851956
Molecular Weight (calculated)
51424.8 Da
IEP (calculated)
8.125
GRAVY (calculated)
-0.112
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVANQGAYL DSVPITSISV NLCVSQFEVK KLLESKTSAT SWPRTHLMDT LIKLNIDRII VSSNGERLPL LLSTLTSVRA SLKTSNLDRT LRITVMFSLL
101: DLKTLHRTHP KSIQRMMHVL KDWESHVVVE TVVDEDMNLD DDFLRSTIES DALLRRRIAG LFIDISHLRQ YGKKTFDWQE KLMVPSLQKE LLNHGRKLTV
201: ATKTTLYDTF TPITNPVTTP ITIPSTNPAP AIVTVPSTNP VTVLPTIPTM SPVNIPPMNP VSTPITVPAT DPFSTPVTTP VVPVTNPATT PTTYPTNPPV
301: TNPVTSYPFT PPVSTPSILP PVTVPSTVPI TPATSGQTWC VAKAGTPDAA LQLALDYACG IGSADCSAIQ PTGSCYNPDT LQAHASYAFN SYYQKNPVAS
401: SCDFAGTAML VNANPSKTYY FLTNLRYLKD YNIDRKFNQP LFIFKVAKND DNPGSHLPYV TDNELGKSH
101: DLKTLHRTHP KSIQRMMHVL KDWESHVVVE TVVDEDMNLD DDFLRSTIES DALLRRRIAG LFIDISHLRQ YGKKTFDWQE KLMVPSLQKE LLNHGRKLTV
201: ATKTTLYDTF TPITNPVTTP ITIPSTNPAP AIVTVPSTNP VTVLPTIPTM SPVNIPPMNP VSTPITVPAT DPFSTPVTTP VVPVTNPATT PTTYPTNPPV
301: TNPVTSYPFT PPVSTPSILP PVTVPSTVPI TPATSGQTWC VAKAGTPDAA LQLALDYACG IGSADCSAIQ PTGSCYNPDT LQAHASYAFN SYYQKNPVAS
401: SCDFAGTAML VNANPSKTYY FLTNLRYLKD YNIDRKFNQP LFIFKVAKND DNPGSHLPYV TDNELGKSH
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.