Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G358500.1 | Wheat | extracellular | 94.36 | 93.9 |
| TraesCS5D01G513400.1 | Wheat | extracellular | 91.42 | 91.65 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 83.09 | 81.69 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 54.17 | 45.01 |
| Os03t0833600-01 | Rice | plasma membrane | 61.27 | 43.55 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 34.07 | 42.12 |
| EER90586 | Sorghum | extracellular | 56.86 | 37.72 |
| Zm00001d012917_P001 | Maize | plasma membrane | 55.88 | 37.19 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 25.74 | 34.2 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 24.75 | 33.55 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 29.66 | 33.43 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 24.02 | 33.22 |
| CDX94970 | Canola | plastid | 24.02 | 33.11 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 28.92 | 32.15 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 10.78 | 32.12 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 25.49 | 31.52 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 13.24 | 31.21 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 12.5 | 31.1 |
| CDY31085 | Canola | plastid | 26.23 | 30.48 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 11.76 | 30.38 |
| CDY32184 | Canola | vacuole | 25.49 | 29.46 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 12.75 | 29.21 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 15.69 | 28.83 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 18.14 | 27.82 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 12.25 | 27.47 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.75 | 25.37 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 37.01 | 24.55 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.5 | 24.4 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 11.52 | 23.74 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 18.38 | 21.99 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 28.19 | 21.82 |
| KRG96680 | Soybean | extracellular | 28.19 | 21.74 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 24.75 | 21.54 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 14.46 | 21.45 |
| KRG90471 | Soybean | vacuole | 31.37 | 21.05 |
| KRH68400 | Soybean | extracellular | 27.21 | 20.63 |
| KRH33760 | Soybean | vacuole | 30.88 | 20.62 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 16.91 | 19.33 |
| TraesCS5B01G366600.1 | Wheat | plastid | 17.65 | 16.98 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G513000.1 | EnsemblPlantsGene:TraesCS5B01G513000 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5B:+:678313399..678314939
Molecular Weight (calculated)
40044.0 Da
IEP (calculated)
6.470
GRAVY (calculated)
0.051
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPALSLIL CMLLLSHGSA QARKTVPGEV VAVADRDGAS GRERFLGGVV DGAAGGSRRR RELLAGAGAT TTRDVFAPVT NPVTVPATNP ASPGGIVTVP
101: ATNPGTGTGF PINPNLPPLY PEPSATPDPT TMPAPFTNPV AAPTMPAPFT GPVTNPATTP TPVPGTSPIT NPATTYPGGA AGGGVAVGSV PTTPVYQAPA
201: TTVPTPTTVQ PAAGAGTGQS TWCVAKAGVT EAALQDGLDY ACGMGGADCS ALQPMGSCYN PNTIQAHASY AFNAYYQRSP SPASCDFGGA GMLVATNPSS
301: GACMYQTSAG SGSAAGYSPA ATGTTFGPVG VTPSFGPVGT TTGTGPAVSS GGSGSTVLNA NNYPGGTSMY GPGNPAGFSD TSSGAALNCS WVLSLIWMFT
401: FAYVKVKV
101: ATNPGTGTGF PINPNLPPLY PEPSATPDPT TMPAPFTNPV AAPTMPAPFT GPVTNPATTP TPVPGTSPIT NPATTYPGGA AGGGVAVGSV PTTPVYQAPA
201: TTVPTPTTVQ PAAGAGTGQS TWCVAKAGVT EAALQDGLDY ACGMGGADCS ALQPMGSCYN PNTIQAHASY AFNAYYQRSP SPASCDFGGA GMLVATNPSS
301: GACMYQTSAG SGSAAGYSPA ATGTTFGPVG VTPSFGPVGT TTGTGPAVSS GGSGSTVLNA NNYPGGTSMY GPGNPAGFSD TSSGAALNCS WVLSLIWMFT
401: FAYVKVKV
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.