Factsheet for TraesCS5B01G398000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G403000.1	Wheat	extracellular	95.12	93.98
TraesCS5A01G393200.1	Wheat	extracellular	92.07	90.42
TraesCS5B01G399400.1	Wheat	extracellular	81.71	84.81
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	46.34	60.32
Os03t0756300-01	Rice	extracellular	60.98	57.14
KRH54678	Soybean	extracellular, nucleus	35.37	52.25
Zm00001d013250_P003	Maize	extracellular	64.02	46.88
HORVU5Hr1G096090.6	Barley	plastid	65.85	46.15
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	64.02	43.03
KXG37528	Sorghum	mitochondrion	68.9	42.64
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	45.12	41.11
PGSC0003DMT400045877	Potato	extracellular	26.22	40.19
Bra026878.1-P	Field mustard	extracellular	34.15	39.72
TraesCS5B01G465400.1	Wheat	extracellular, plasma membrane	40.85	36.81
CDY26741	Canola	extracellular	41.46	36.56
PGSC0003DMT400063348	Potato	extracellular	40.85	36.22
CDY16115	Canola	extracellular	34.15	36.13
AT1G18650.1	Thale cress	extracellular	40.24	35.87
Solyc03g115200.2.1	Tomato	extracellular	40.85	35.83
CDX83826	Canola	extracellular	39.63	35.33
Bra026879.1-P	Field mustard	extracellular	30.49	35.21
CDY19232	Canola	extracellular	40.24	35.11
CDY51213	Canola	extracellular	34.15	34.78
Bra025116.1-P	Field mustard	extracellular	34.15	34.78
CDX96707	Canola	extracellular	39.02	34.59
CDY02169	Canola	extracellular	40.24	34.02
AT2G03505.1	Thale cress	extracellular	34.76	33.93
CDY02987	Canola	extracellular	32.93	33.54
KRG89485	Soybean	extracellular	35.98	33.52
KRH03122	Soybean	extracellular, nucleus	41.46	33.5
CDY42854	Canola	extracellular	39.63	33.33
Bra029334.1-P	Field mustard	extracellular	39.63	33.33
CDY16822	Canola	extracellular	40.24	33.17
CDX87201	Canola	extracellular	40.24	33.17
Bra035941.1-P	Field mustard	extracellular	40.24	33.17
VIT_17s0000g07260.t01	Wine grape	extracellular	41.46	32.85
KRH50525	Soybean	extracellular	36.59	32.79
CDY65418	Canola	cytosol	29.27	32.65
VIT_01s0011g00570.t01	Wine grape	extracellular	38.41	32.64
CDY23085	Canola	extracellular, plasma membrane, vacuole	37.8	32.12
AT5G61130.1	Thale cress	extracellular	39.02	31.84
CDY33795	Canola	extracellular	34.15	31.28
Bra026880.1-P	Field mustard	extracellular	34.15	31.28
CDY16114	Canola	extracellular	34.15	31.28
CDY34558	Canola	extracellular	32.32	30.81
Bra016724.1-P	Field mustard	extracellular	32.32	30.81
CDX96880	Canola	extracellular	32.32	30.81
Bra009313.1-P	Field mustard	extracellular	39.63	30.66
CDX69983	Canola	extracellular	39.63	30.66
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	25.61	30.66
PGSC0003DMT400003054	Potato	extracellular	35.37	30.37
Solyc01g010310.2.1	Tomato	extracellular	34.76	30.16
CDX98134	Canola	extracellular	34.76	29.84
KRH75030	Soybean	extracellular	39.02	29.77
Bra012981.1-P	Field mustard	extracellular, vacuole	40.24	29.73
Solyc05g012380.2.1	Tomato	extracellular	36.59	29.7
CDY36415	Canola	extracellular	35.37	29.59
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.37	29.29
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.59	29.27
CDY65205	Canola	plasma membrane	34.76	28.79
KRH56823	Soybean	extracellular	37.2	28.64
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	34.15	28.57
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.15	28.57
Bra019700.1-P	Field mustard	extracellular	34.15	28.43
AT5G08000.2	Thale cress	extracellular	36.59	28.17
PGSC0003DMT400072939	Potato	extracellular	35.37	28.16
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	30.49	28.09
CDX99038	Canola	extracellular	39.63	27.66
KRH70882	Soybean	extracellular	36.59	27.65
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	32.93	27.41
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	33.54	26.32
Bra004003.1-P	Field mustard	extracellular	34.76	26.15
CDY07353	Canola	extracellular	34.76	26.15
TraesCS2B01G272100.1	Wheat	extracellular	27.44	26.01
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	43.29	25.82
CDY04273	Canola	extracellular	34.15	25.69
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	32.93	25.59
CDY54140	Canola	extracellular	31.71	24.88
CDY50312	Canola	extracellular	31.71	24.19
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	33.54	23.21
AT1G69295.1	Thale cress	extracellular	31.1	22.97
Bra038314.1-P	Field mustard	mitochondrion	30.49	22.12
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	32.93	20.3
Solyc04g005420.2.1	Tomato	extracellular, vacuole	34.76	18.57
CDY47016	Canola	extracellular	39.63	17.47
TraesCS7B01G384100.1	Wheat	extracellular	23.17	17.12
TraesCS3B01G257100.1	Wheat	extracellular	31.1	14.96
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	31.1	14.29
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	28.66	14.24
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	31.1	12.5
TraesCS5B01G366600.1	Wheat	plastid	26.22	10.14

Protein Annotations

EnsemblPlants:TraesCS5B01G398000.1	EnsemblPlantsGene:TraesCS5B01G398000	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:-:575629453..575631366

Molecular Weight (calculated)

16638.8 Da

IEP (calculated)

7.093

GRAVY (calculated)

0.195

Length

164 amino acids

Sequence
(BLAST)

001: MASHAGRLLL LLALAAALAG RSAEGAWCVC RTDLPDATLQ RTLDYACGSA ADCKPIQPNA ACFAPDTVKA HCSYAVNSYY QRSGQNSLAC VFSGTAVVSS
101: VDPSTNGCKY PATPSAPDSP PPPMAQGPNG KDTSGGADVL PVAGTATRAV ILACCSLLAL YLMA

Best Arabidopsis Sequence Match ( AT5G08000.2 )
(BLAST)

001: MQLLLMICKH LNLSKQDLQI LLASLTILFP FFSSLVGASW CVCKTGLSDS VLQKTLDYAC GNGADCNPTH PKGSCFNPDN VRAHCNYAVN SFFQKKGQAS
101: ESCNFTGTAT LTTTDPSYTG CAFPSSASGS SGSGSTTVTP GKNSPKGSNS ITTFPGGNSP YSGTPSTGLL GGNITDATGT GLNPDYSTES SGFALYYSNN
201: LLLTGFCSLV MML

Arabidopsis Description

E13L3glucan endo-1,3-beta-glucosidase-like protein 3 [Source:TAIR;Acc:AT5G08000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.