Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65205 | Canola | plasma membrane | 70.05 | 69.7 |
| CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.02 | 68.37 |
| Bra012458.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 68.02 | 68.37 |
| AT1G69295.1 | Thale cress | extracellular | 62.44 | 55.41 |
| Solyc05g012380.2.1 | Tomato | extracellular | 37.06 | 36.14 |
| AT2G03505.1 | Thale cress | extracellular | 30.46 | 35.71 |
| GSMUA_Achr4P23440_001 | Banana | cytosol | 26.9 | 35.33 |
| GSMUA_Achr4P32790_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 31.98 | 35.0 |
| PGSC0003DMT400072939 | Potato | extracellular | 36.55 | 34.95 |
| AT1G18650.1 | Thale cress | extracellular | 32.49 | 34.78 |
| Solyc01g010310.2.1 | Tomato | extracellular | 32.49 | 33.86 |
| GSMUA_Achr7P26650_001 | Banana | extracellular | 19.8 | 33.62 |
| AT5G35740.1 | Thale cress | extracellular | 20.3 | 33.61 |
| GSMUA_Achr8P28170_001 | Banana | extracellular | 26.4 | 33.55 |
| PGSC0003DMT400003054 | Potato | extracellular | 32.49 | 33.51 |
| EER97492 | Sorghum | extracellular | 32.49 | 32.99 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 27.41 | 32.93 |
| TraesCS5D01G403000.1 | Wheat | extracellular | 27.41 | 32.53 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 27.41 | 32.34 |
| GSMUA_Achr9P07140_001 | Banana | extracellular | 30.46 | 32.26 |
| TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.96 | 32.11 |
| Os03t0756300-01 | Rice | extracellular | 28.43 | 32.0 |
| GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 30.96 | 31.77 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 30.46 | 31.41 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.47 | 31.31 |
| Zm00001d006776_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 31.47 | 31.16 |
| Zm00001d006777_P003 | Maize | endoplasmic reticulum, extracellular, vacuole | 31.47 | 31.16 |
| GSMUA_Achr5P08900_001 | Banana | extracellular | 29.95 | 31.05 |
| Zm00001d022059_P001 | Maize | endoplasmic reticulum, extracellular | 30.96 | 30.81 |
| Zm00001d047293_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 30.46 | 30.61 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 24.37 | 30.38 |
| HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 31.98 | 29.86 |
| TraesCS3D01G299600.1 | Wheat | extracellular | 29.44 | 29.59 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 29.44 | 29.59 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.44 | 29.44 |
| EER92116 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 29.44 | 29.44 |
| TraesCS2D01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.44 | 29.29 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.46 | 29.27 |
| Os03t0421800-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 27.92 | 29.26 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 30.96 | 29.19 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.44 | 29.0 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.46 | 28.71 |
| HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 18.27 | 28.57 |
| TraesCS1D01G335200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.47 | 28.57 |
| Os07t0600700-01 | Rice | extracellular | 27.92 | 28.35 |
| HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 31.98 | 27.88 |
| Zm00001d029539_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 27.92 | 27.5 |
| AT2G04910.1 | Thale cress | extracellular | 17.26 | 27.42 |
| OQU87600 | Sorghum | extracellular | 25.89 | 27.13 |
| Os01t0763900-01 | Rice | extracellular | 28.43 | 27.05 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 28.93 | 27.01 |
| Zm00001d043361_P001 | Maize | endoplasmic reticulum, extracellular | 24.87 | 26.06 |
| AT5G61130.1 | Thale cress | extracellular | 26.4 | 25.87 |
| Os05t0512600-01 | Rice | extracellular | 28.93 | 25.0 |
| AT5G08000.2 | Thale cress | extracellular | 26.9 | 24.88 |
| GSMUA_Achr4P10810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 30.46 | 24.69 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 28.43 | 24.24 |
| Zm00001d010728_P005 | Maize | extracellular | 26.9 | 24.2 |
| Zm00001d013250_P003 | Maize | extracellular | 27.41 | 24.11 |
| EES18492 | Sorghum | extracellular | 26.9 | 23.14 |
| AT2G30933.1 | Thale cress | extracellular | 26.4 | 22.91 |
| Zm00001d038682_P001 | Maize | extracellular | 26.4 | 22.61 |
| Zm00001d034062_P001 | Maize | cytosol, golgi, peroxisome | 27.92 | 22.54 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 18.78 | 22.02 |
| KXG37528 | Sorghum | mitochondrion | 28.93 | 21.51 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 29.95 | 21.45 |
| HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 30.96 | 20.54 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 20.3 | 20.41 |
| HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 29.95 | 20.27 |
| HORVU5Hr1G096090.6 | Barley | plastid | 22.84 | 19.23 |
| AT1G29380.1 | Thale cress | extracellular | 28.93 | 18.1 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 28.93 | 17.27 |
| AT3G58100.2 | Thale cress | cytosol | 19.8 | 15.23 |
| AT5G67460.1 | Thale cress | vacuole | 21.32 | 11.05 |
| AT1G79480.1 | Thale cress | extracellular | 20.81 | 10.33 |
Protein Annotations
| MapMan:35.1 | EntrezGene:839186 | UniProt:A0A178W5V7 | ProteinID:AAF98573.1 | ProteinID:AEE30693.1 | EMBL:AK228207 |
| ArrayExpress:AT1G26450 | EnsemblPlantsGene:AT1G26450 | RefSeq:AT1G26450 | TAIR:AT1G26450 | RefSeq:AT1G26450-TAIR-G | EnsemblPlants:AT1G26450.1 |
| TAIR:AT1G26450.1 | Unigene:At.22714 | EMBL:BT005854 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0031225 | GO:GO:0046658 | RefSeq:NP_173968.1 |
| ProteinID:OAP13091.1 | PFAM:PF07983 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR32227 |
| PANTHER:PTHR32227:SF98 | UniProt:Q9FZD0 | SMART:SM00768 | SignalP:SignalP-noTM | UniParc:UPI00000482D1 | InterPro:X8 |
| SEG:seg | : | : | : | : | : |
Description
Carbohydrate-binding X8 domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZD0]
Coordinates
chr1:-:9148636..9150250
Molecular Weight (calculated)
20040.2 Da
IEP (calculated)
4.454
GRAVY (calculated)
-0.083
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVLLPLFLL SFMFTYSNAA VCVCKDANEL DLQKVIDFAC GGGADCAQIQ TTGACYQPNT LKNHCDVAVN SYYQKKASTG ATCDFNGAAV ISTSPPSTTS
101: SCLSSSSSNG TPTAGYPSTG NSTTASPGTT NPSTGNSTNS TLPTNDKPTS STITFPDSTT MGPSSSTSGD PNGGEELSVR TTTIILLTTI AAVALRV
101: SCLSSSSSNG TPTAGYPSTG NSTTASPGTT NPSTGNSTNS TLPTNDKPTS STITFPDSTT MGPSSSTSGD PNGGEELSVR TTTIILLTTI AAVALRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.