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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400003054 Potato extracellular 91.01 90.05
Solyc05g012380.2.1 Tomato extracellular 57.67 53.96
Solyc03g115200.2.1 Tomato extracellular 43.92 44.38
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 43.92 43.23
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 40.21 42.22
GSMUA_Achr5P08900_001 Banana extracellular 42.33 42.11
GSMUA_Achr4P23440_001 Banana cytosol 33.33 42.0
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 42.33 41.88
GSMUA_Achr9P07140_001 Banana extracellular 40.74 41.4
EER97492 Sorghum extracellular 39.15 38.14
GSMUA_Achr7P26650_001 Banana extracellular 22.75 37.07
GSMUA_Achr8P28170_001 Banana extracellular 30.16 36.77
Os03t0756300-01 Rice extracellular 33.86 36.57
Os07t0600700-01 Rice extracellular 37.04 36.08
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.57 35.68
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 37.57 35.68
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 36.51 34.85
TraesCS5B01G398000.1 Wheat extracellular 30.16 34.76
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 35.98 34.69
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 35.98 34.69
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.51 34.5
CDY65205 Canola plasma membrane 35.98 34.34
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.98 34.34
TraesCS5D01G403000.1 Wheat extracellular 30.16 34.34
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.45 33.84
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.51 33.66
TraesCS5B01G399400.1 Wheat extracellular 28.04 33.54
TraesCS5A01G393200.1 Wheat extracellular 29.63 33.53
Solyc04g005420.2.1 Tomato extracellular, vacuole 53.97 33.22
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.33 33.16
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 32.8 32.98
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 33.86 32.49
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.86 32.49
TraesCS3D01G299600.1 Wheat extracellular 33.33 32.14
HORVU4Hr1G028360.1 Barley peroxisome, plastid 21.16 31.75
CDY07353 Canola extracellular 36.51 31.65
CDY04273 Canola extracellular 36.51 31.65
Bra004003.1-P Field mustard extracellular 36.51 31.65
TraesCS3A01G302400.1 Wheat extracellular 32.8 31.63
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.8 31.63
CDY54140 Canola extracellular 34.92 31.58
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.33 31.5
CDY50312 Canola extracellular 35.45 31.16
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 32.28 30.96
Solyc07g047710.2.1 Tomato extracellular 18.52 30.7
AT1G69295.1 Thale cress extracellular 35.98 30.63
Solyc11g012580.1.1 Tomato extracellular 18.52 29.91
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.8 29.67
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 32.8 29.38
Bra038314.1-P Field mustard mitochondrion 34.92 29.2
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 36.51 29.11
TraesCS1A01G332500.1 Wheat extracellular 31.75 28.71
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.8 28.57
OQU87600 Sorghum extracellular 28.04 28.19
Os01t0763900-01 Rice extracellular 30.69 28.02
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 35.98 27.98
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 27.51 27.66
Solyc09g091920.2.1 Tomato endoplasmic reticulum, extracellular 28.57 27.41
Os05t0512600-01 Rice extracellular 32.8 27.19
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 32.28 26.99
Solyc04g058080.2.1 Tomato extracellular 24.87 26.4
Zm00001d010728_P005 Maize extracellular 30.16 26.03
EES18492 Sorghum extracellular 30.69 25.33
Zm00001d013250_P003 Maize extracellular 29.1 24.55
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 30.69 23.77
Solyc12g098410.1.1 Tomato endoplasmic reticulum, extracellular 24.87 23.74
HORVU2Hr1G033470.1 Barley cytosol, plastid 37.04 23.57
Zm00001d038682_P001 Maize extracellular 28.57 23.48
TraesCS5A01G548300.1 Wheat plasma membrane 24.34 23.47
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 33.33 22.91
KXG37528 Sorghum mitochondrion 30.69 21.89
HORVU3Hr1G074010.3 Barley cytosol, plastid 32.8 21.31
HORVU5Hr1G096090.6 Barley plastid 25.93 20.94
Solyc07g056310.2.1 Tomato extracellular 26.98 20.65
Solyc05g016390.2.1 Tomato endoplasmic reticulum, extracellular 24.87 18.22
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 20.63 17.33
Solyc02g071200.2.1 Tomato extracellular 27.51 17.16
Solyc12g017360.1.1 Tomato cytosol, peroxisome, plastid 21.69 13.9
Solyc01g101120.2.1 Tomato endoplasmic reticulum, golgi 26.98 13.9
Protein Annotations
MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0030246
GO:GO:0030247GO:GO:0046658UniProt:K4ATM6PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF147
SMART:SM00768SignalP:SignalP-noTMEnsemblPlantsGene:Solyc01g010310.2EnsemblPlants:Solyc01g010310.2.1TMHMM:TMhelixUniParc:UPI0002761AEE
InterPro:X8SEG:seg::::
Description
No Description!
Coordinates
chr1:-:5134694..5138389
Molecular Weight (calculated)
19223.6 Da
IEP (calculated)
6.472
GRAVY (calculated)
0.101
Length
189 amino acids
Sequence
(BLAST)
001: MAAFMLSLVF LLAIIGHSSA SYCTCKDGID NKILQENIDF ACGSGADCTA IHTNGACFNP DTIKDHCNYA VNSYYQRKGA SGASCDFKGT ATLTPTAPAS
101: AGSGCVYQST AGNTSPTTVP GTTSPSTGGT STSTGTGSGT TLPGTNPAFG LGPSGMTNTD INGATIIHQN TMFFTITLLF TTLLVCLRA
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.