Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER92116 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 81.0 | 82.23 |
Zm00001d047293_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 77.0 | 78.57 |
TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 61.0 | 64.21 |
Os03t0421800-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 60.0 | 63.83 |
TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 60.0 | 60.91 |
TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 60.0 | 60.61 |
Zm00001d006776_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 50.0 | 50.25 |
Zm00001d006777_P003 | Maize | endoplasmic reticulum, extracellular, vacuole | 50.0 | 50.25 |
Zm00001d022059_P001 | Maize | endoplasmic reticulum, extracellular | 48.5 | 48.99 |
KRH54678 | Soybean | extracellular, nucleus | 25.5 | 45.95 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 40.5 | 42.41 |
GSMUA_Achr9P07140_001 | Banana | extracellular | 39.0 | 41.94 |
PGSC0003DMT400045877 | Potato | extracellular | 22.0 | 41.12 |
Zm00001d043361_P001 | Maize | endoplasmic reticulum, extracellular | 38.5 | 40.96 |
GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 38.5 | 40.1 |
GSMUA_Achr7P26650_001 | Banana | extracellular | 22.5 | 38.79 |
HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 43.0 | 38.05 |
GSMUA_Achr5P08900_001 | Banana | extracellular | 36.0 | 37.89 |
VIT_17s0000g07260.t01 | Wine grape | extracellular | 39.0 | 37.68 |
GSMUA_Achr8P28170_001 | Banana | extracellular | 29.0 | 37.42 |
Bra026878.1-P | Field mustard | extracellular | 26.0 | 36.88 |
Bra026879.1-P | Field mustard | extracellular | 26.0 | 36.62 |
KRH50525 | Soybean | extracellular | 33.5 | 36.61 |
KRG89485 | Soybean | extracellular | 32.0 | 36.36 |
Solyc03g115200.2.1 | Tomato | extracellular | 34.0 | 36.36 |
Bra026880.1-P | Field mustard | extracellular | 32.5 | 36.31 |
CDY33795 | Canola | extracellular | 32.5 | 36.31 |
CDY16115 | Canola | extracellular | 28.0 | 36.13 |
CDY16114 | Canola | extracellular | 32.0 | 35.75 |
PGSC0003DMT400063348 | Potato | extracellular | 33.0 | 35.68 |
CDY42854 | Canola | extracellular | 34.0 | 34.87 |
CDY19232 | Canola | extracellular | 32.5 | 34.57 |
KRH75030 | Soybean | extracellular | 37.0 | 34.42 |
CDY26741 | Canola | extracellular | 32.0 | 34.41 |
VIT_01s0011g00570.t01 | Wine grape | extracellular | 33.0 | 34.2 |
CDX96707 | Canola | extracellular | 31.5 | 34.05 |
Bra029334.1-P | Field mustard | extracellular | 33.0 | 33.85 |
CDX83826 | Canola | extracellular | 31.0 | 33.7 |
Zm00001d016545_P001 | Maize | extracellular | 31.5 | 33.69 |
Bra025116.1-P | Field mustard | extracellular | 27.0 | 33.54 |
CDY51213 | Canola | extracellular | 27.0 | 33.54 |
KRH03122 | Soybean | extracellular, nucleus | 34.0 | 33.5 |
CDY04273 | Canola | extracellular | 36.5 | 33.49 |
AT2G03505.1 | Thale cress | extracellular | 28.0 | 33.33 |
CDY65418 | Canola | cytosol | 24.5 | 33.33 |
Solyc01g010310.2.1 | Tomato | extracellular | 31.5 | 33.33 |
KRH70882 | Soybean | extracellular | 36.0 | 33.18 |
CDX87201 | Canola | extracellular | 33.0 | 33.17 |
CDY16822 | Canola | extracellular | 33.0 | 33.17 |
Zm00001d050544_P001 | Maize | extracellular | 31.0 | 33.16 |
Bra004003.1-P | Field mustard | extracellular | 36.0 | 33.03 |
CDY07353 | Canola | extracellular | 36.0 | 33.03 |
PGSC0003DMT400003054 | Potato | extracellular | 31.5 | 32.98 |
Bra035941.1-P | Field mustard | extracellular | 32.5 | 32.66 |
CDY23085 | Canola | extracellular, plasma membrane, vacuole | 31.5 | 32.64 |
AT1G18650.1 | Thale cress | extracellular | 30.0 | 32.61 |
Bra016724.1-P | Field mustard | extracellular | 28.0 | 32.56 |
CDX96880 | Canola | extracellular | 28.0 | 32.56 |
CDY34558 | Canola | extracellular | 28.0 | 32.56 |
CDX98134 | Canola | extracellular | 31.0 | 32.46 |
CDY02987 | Canola | extracellular | 26.0 | 32.3 |
PGSC0003DMT400072939 | Potato | extracellular | 32.5 | 31.55 |
Zm00001d010728_P005 | Maize | extracellular | 34.5 | 31.51 |
Bra019700.1-P | Field mustard | extracellular | 31.0 | 31.47 |
CDY02169 | Canola | extracellular | 30.5 | 31.44 |
AT5G61130.1 | Thale cress | extracellular | 31.5 | 31.34 |
GSMUA_Achr4P10810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 37.5 | 30.86 |
Solyc05g012380.2.1 | Tomato | extracellular | 31.0 | 30.69 |
AT1G69295.1 | Thale cress | extracellular | 34.0 | 30.63 |
CDY36415 | Canola | extracellular | 30.0 | 30.61 |
CDY54140 | Canola | extracellular | 31.5 | 30.14 |
CDY50312 | Canola | extracellular | 32.0 | 29.77 |
KRH56823 | Soybean | extracellular | 31.5 | 29.58 |
Zm00001d038682_P001 | Maize | extracellular | 34.0 | 29.57 |
AT5G08000.2 | Thale cress | extracellular | 31.0 | 29.11 |
Zm00001d046155_P001 | Maize | extracellular | 25.5 | 28.98 |
Bra009313.1-P | Field mustard | extracellular | 30.5 | 28.77 |
CDX69983 | Canola | extracellular | 30.5 | 28.77 |
CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.0 | 28.69 |
CDY65205 | Canola | plasma membrane | 28.0 | 28.28 |
Zm00001d013250_P003 | Maize | extracellular | 31.5 | 28.12 |
Bra012458.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 27.5 | 28.06 |
CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.5 | 28.06 |
AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 27.5 | 27.92 |
Bra012981.1-P | Field mustard | extracellular, vacuole | 30.5 | 27.48 |
Bra038314.1-P | Field mustard | mitochondrion | 31.0 | 27.43 |
Zm00001d034062_P001 | Maize | cytosol, golgi, peroxisome | 32.5 | 26.64 |
AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 28.0 | 26.54 |
CDX99038 | Canola | extracellular | 31.0 | 26.38 |
Zm00001d007864_P001 | Maize | extracellular | 21.5 | 24.29 |
Zm00001d042912_P001 | Maize | nucleus | 21.0 | 23.6 |
Zm00001d009686_P002 | Maize | extracellular | 27.5 | 22.45 |
Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 28.0 | 21.62 |
Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 30.5 | 19.87 |
Zm00001d011431_P001 | Maize | plasma membrane | 28.5 | 18.45 |
CDY47016 | Canola | extracellular | 32.5 | 17.47 |
Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 27.0 | 15.84 |
Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 21.0 | 12.8 |
Zm00001d026281_P003 | Maize | plastid | 26.5 | 9.67 |
Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 22.5 | 9.16 |
Zm00001d012917_P001 | Maize | plasma membrane | 26.0 | 8.48 |
Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 22.0 | 7.68 |
Protein Annotations
EMBL:BT087484 | EnsemblPlants:Zm00001d029539_P001 | EnsemblPlants:Zm00001d029539_T001 | EnsemblPlantsGene:Zm00001d029539 | EntrezGene:100283474 | InterPro:X8 |
PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 | ProteinID:ONL98934.1 | SEG:seg | SignalP:SignalP-noTM |
SMART:SM00768 | UniParc:UPI0001A4C833 | UniProt:C4J9I7 | MapMan:35.2 | : | : |
Description
PLASMODESMATA CALLOSE-BINDING PROTEIN 2
Coordinates
chr1:-:75377980..75379495
Molecular Weight (calculated)
19096.8 Da
IEP (calculated)
3.892
GRAVY (calculated)
0.201
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASSSALAL VAAVLLLSSP LAASDFCVCR SDQPTAVLQK AIDFACGPQG GADCTPILQG GGCYSPDTAA AHCSWAANTY YQNNKARGAT CDFGGAATVS
101: TTDPSTNDSS TTDTSFSGCT FASSATSAGA GTGTGTAGSS TFSPSAGTGF NGTGNGMGGS TTTGLGPTGN AFDAAAAAAP GLLPSAASLG LALAVLSFLT
101: TTDPSTNDSS TTDTSFSGCT FASSATSAGA GTGTGTAGSS TFSPSAGTGF NGTGNGMGGS TTTGLGPTGN AFDAAAAAAP GLLPSAASLG LALAVLSFLT
001: MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI
Arabidopsis Description
PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.