Factsheet for Zm00001d012917_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90586	Sorghum	extracellular	79.12	78.86
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	62.48	78.0
Os03t0833600-01	Rice	plasma membrane	55.95	59.76
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	37.19	55.88
TraesCS4A01G358500.1	Wheat	extracellular	37.03	55.37
TraesCS5D01G513400.1	Wheat	extracellular	36.7	55.28
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	34.91	51.57
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	23.49	42.23
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	18.6	37.13
CDY64750	Canola	endoplasmic reticulum, vacuole	17.94	36.54
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	21.53	36.46
CDX94970	Canola	plastid	17.46	36.15
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	17.29	35.93
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	21.21	35.42
AT1G09460.1	Thale cress	extracellular, vacuole	18.43	34.24
Zm00001d046155_P001	Maize	extracellular	9.62	33.52
CDY31085	Canola	plastid	19.09	33.33
CDY32184	Canola	vacuole	18.92	32.86
Zm00001d042912_P001	Maize	nucleus	9.46	32.58
VIT_14s0060g00440.t01	Wine grape	vacuole	32.46	32.36
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	9.79	31.91
Zm00001d007864_P001	Maize	extracellular	9.14	31.64
KRG96680	Soybean	extracellular	27.08	31.38
KRH68400	Soybean	extracellular	27.08	30.86
Zm00001d016545_P001	Maize	extracellular	9.14	29.95
Zm00001d050544_P001	Maize	extracellular	8.97	29.41
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	9.46	29.15
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	9.46	29.15
KRH33760	Soybean	vacuole	29.04	29.13
KRG90471	Soybean	vacuole	28.87	29.11
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	12.23	28.96
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	9.14	28.28
Zm00001d009686_P002	Maize	extracellular	11.26	28.16
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	8.97	28.06
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	8.48	26.0
Zm00001d011431_P001	Maize	plasma membrane	12.89	25.57
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	20.72	24.1
GSMUA_Achr2P02010_001	Banana	cytosol	18.43	24.09
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	9.46	23.77
Zm00001d013250_P003	Maize	extracellular	8.65	23.66
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	12.23	22.87
Zm00001d010728_P005	Maize	extracellular	7.99	22.37
Zm00001d038682_P001	Maize	extracellular	7.99	21.3
Zm00001d026281_P003	Maize	plastid	13.38	14.96
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	13.7	14.66

Protein Annotations

EMBL:BT063717	EnsemblPlants:Zm00001d012917_P001	EnsemblPlants:Zm00001d012917_T001	EnsemblPlantsGene:Zm00001d012917	InterPro:X8	PANTHER:PTHR32227
PANTHER:PTHR32227:SF118	PFAM:PF07983	ProteinID:AQK61822.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768
UniParc:UPI0001948EF8	UniProt:C0P5Z8	MapMan:35.1	:	:	:

Description

Carbohydrate-binding X8 domain superfamily protein

Coordinates

chr5:+:1934208..1936982

Molecular Weight (calculated)

62697.5 Da

IEP (calculated)

7.903

GRAVY (calculated)

0.003

Length

613 amino acids

Sequence
(BLAST)

001: MAAASCPVAL AFFSSSCILL LLQTICCSGV FVELSYDSTQ VKVQVLSTSV VTDGYRVMVT DKQRAYLFLK PFACRDKPCG SESTAGSFIS DVLGPDRRLN
101: VSGIVVTATG TRQLGALLRT LRSLQASLGD AGLAERVKVS PELSMSSLRV VGKDLARATK KRRWGKVLEF VRRTRSLVFV RVDTEAGANG EVVAVIEEAA
201: AQVAAVLGAD VGVVLHIKSR AVPSAAAMEK LTGRGEKRSL GVLVDVSFPR RDRELGEARA TAHDEFSPVS NPATTPVSNP VTVPATNPVA NPMSPGFVTV
301: PSTNPGNGFA SNTNLPPLYP EPTTAPVTMP TPDPTTTMPP PVTVPSPFAN PVAAPTTTMP GTVTNPATTP SQFPPVTNPV TTYPYPQQGG MPGTTPEVYQ
401: PPATTTPGTA QQSAPSVTGQ GQAWCVAKSG LMDAALQDGI DYACGAGGAD CSAIQPMGTC YNPNTLQAHA SYAFNSYFQR NPSATSCDFG GAGMLVNVNP
501: SSGTCVYQTS AGFGAGYSPG TTTGGGGVPS GYTPGMPGAG YGAAGGGVSG TMGGGSGSTV LNANNPGGNS MYGGYDNTAG LTAGSAPLPC GGGGWAVLCL
601: VWMVTFAFVK EKV

Best Arabidopsis Sequence Match ( AT1G09460.1 )
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.