Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 93.9 | 94.36 |
| TraesCS5D01G513400.1 | Wheat | extracellular | 89.02 | 89.68 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 82.93 | 81.93 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 53.9 | 45.01 |
| Os03t0833600-01 | Rice | plasma membrane | 60.98 | 43.55 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 33.9 | 42.12 |
| EER90586 | Sorghum | extracellular | 56.59 | 37.72 |
| Zm00001d012917_P001 | Maize | plasma membrane | 55.37 | 37.03 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 25.85 | 34.53 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 25.12 | 34.22 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 24.39 | 33.9 |
| CDX94970 | Canola | plastid | 24.39 | 33.78 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 29.51 | 33.43 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 28.78 | 32.15 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 25.85 | 32.12 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 13.17 | 31.21 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 14.88 | 31.12 |
| CDY31085 | Canola | plastid | 26.34 | 30.77 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 12.44 | 30.54 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 12.93 | 29.78 |
| CDY32184 | Canola | vacuole | 25.61 | 29.75 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 10.0 | 29.5 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 12.93 | 29.12 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 13.9 | 29.08 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 18.54 | 28.25 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 13.17 | 27.0 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 14.39 | 26.94 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 13.41 | 26.32 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.2 | 25.38 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 37.32 | 24.88 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 18.29 | 22.52 |
| KRG96680 | Soybean | extracellular | 28.29 | 21.93 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 28.05 | 21.82 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 24.39 | 21.32 |
| KRG90471 | Soybean | vacuole | 31.46 | 21.22 |
| KRH68400 | Soybean | extracellular | 27.07 | 20.63 |
| KRH33760 | Soybean | vacuole | 30.73 | 20.62 |
| TraesCS2A01G425000.1 | Wheat | plastid | 16.59 | 18.84 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 18.54 | 16.41 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G358500.1 | EnsemblPlantsGene:TraesCS4A01G358500 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4A:+:631900053..631901517
Molecular Weight (calculated)
40097.8 Da
IEP (calculated)
6.471
GRAVY (calculated)
-0.038
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPALSLVL CMLLLSHGSA QARKTVPGEV VPAADRDGAS GRERFLGGGV EGAAGGSRRR RELLAGAGAT TTRDVFAPVT NPVTVPATNP ASPGGIVTVP
101: ATNPGTGTGS ATNPNLPPLY PEPSTTPDPT TMPAPFSNPV AAPTMPAPFT APVTNPATTP TPVPGTAPIT NPATTYPGGS TGAGSGVGSV PTTPVYQAPA
201: TTVPTPTTVQ PAAGGTGQST WCVAKAGVTE AALQDGLDYA CGMGGADCSA LQPMGSCYNP NTMQAHASYA FNAYYQRSPS PASCDFGGAG MLVATNPSSG
301: TCMYQASSGS GSAAGYSPAA TGTTSGPVGV TPSFGPVGTT TGTGTGPAVS SGGSGSTVLN ANNYPGGTSM YGPGNPAGFS DTSSGAASLN CSWVLSLIWM
401: FTFAYVKVKV
101: ATNPGTGTGS ATNPNLPPLY PEPSTTPDPT TMPAPFSNPV AAPTMPAPFT APVTNPATTP TPVPGTAPIT NPATTYPGGS TGAGSGVGSV PTTPVYQAPA
201: TTVPTPTTVQ PAAGGTGQST WCVAKAGVTE AALQDGLDYA CGMGGADCSA LQPMGSCYNP NTMQAHASYA FNAYYQRSPS PASCDFGGAG MLVATNPSSG
301: TCMYQASSGS GSAAGYSPAA TGTTSGPVGV TPSFGPVGTT TGTGTGPAVS SGGSGSTVLN ANNYPGGTSM YGPGNPAGFS DTSSGAASLN CSWVLSLIWM
401: FTFAYVKVKV
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.