Factsheet for TraesCS5A01G393200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G398000.1	Wheat	extracellular	90.42	92.07
TraesCS5D01G403000.1	Wheat	extracellular	89.82	90.36
TraesCS5B01G399400.1	Wheat	extracellular	79.64	84.18
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	46.11	61.11
Os03t0756300-01	Rice	extracellular	58.08	55.43
KRH54678	Soybean	extracellular, nucleus	33.53	50.45
Zm00001d013250_P003	Maize	extracellular	62.87	46.88
HORVU5Hr1G096090.6	Barley	plastid	63.47	45.3
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	62.87	43.03
KXG37528	Sorghum	mitochondrion	67.07	42.26
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	44.31	41.11
PGSC0003DMT400045877	Potato	extracellular	25.15	39.25
Bra026878.1-P	Field mustard	extracellular	32.93	39.01
TraesCS5A01G456400.1	Wheat	extracellular, plasma membrane	40.72	37.36
Bra025116.1-P	Field mustard	extracellular	34.73	36.02
CDY51213	Canola	extracellular	34.73	36.02
CDY26741	Canola	extracellular	40.12	36.02
CDY16115	Canola	extracellular	32.93	35.48
Bra026879.1-P	Field mustard	extracellular	29.94	35.21
PGSC0003DMT400063348	Potato	extracellular	38.92	35.14
CDY02987	Canola	extracellular	33.53	34.78
Solyc03g115200.2.1	Tomato	extracellular	38.92	34.76
AT1G18650.1	Thale cress	extracellular	37.72	34.24
TraesCS3A01G302400.1	Wheat	extracellular	40.12	34.18
CDY19232	Canola	extracellular	38.32	34.04
CDY65418	Canola	cytosol	29.94	34.01
AT2G03505.1	Thale cress	extracellular	34.13	33.93
CDX83826	Canola	extracellular	37.13	33.7
Bra035941.1-P	Field mustard	extracellular	40.12	33.67
CDX87201	Canola	extracellular	40.12	33.67
CDY16822	Canola	extracellular	40.12	33.67
CDY02169	Canola	extracellular	38.92	33.51
KRH03122	Soybean	extracellular, nucleus	40.12	33.0
CDX96707	Canola	extracellular	36.53	32.97
Bra026880.1-P	Field mustard	extracellular	34.73	32.4
CDY33795	Canola	extracellular	34.73	32.4
KRG89485	Soybean	extracellular	34.13	32.39
VIT_17s0000g07260.t01	Wine grape	extracellular	40.12	32.37
CDY42854	Canola	extracellular	37.72	32.31
Bra029334.1-P	Field mustard	extracellular	37.72	32.31
CDY23085	Canola	extracellular, plasma membrane, vacuole	37.13	32.12
CDY16114	Canola	extracellular	34.13	31.84
KRH50525	Soybean	extracellular	34.73	31.69
AT5G61130.1	Thale cress	extracellular	37.72	31.34
VIT_01s0011g00570.t01	Wine grape	extracellular	35.93	31.09
PGSC0003DMT400003054	Potato	extracellular	35.33	30.89
CDY34558	Canola	extracellular	31.14	30.23
CDX96880	Canola	extracellular	31.14	30.23
Bra016724.1-P	Field mustard	extracellular	31.14	30.23
Solyc05g012380.2.1	Tomato	extracellular	36.53	30.2
CDX98134	Canola	extracellular	34.13	29.84
Solyc01g010310.2.1	Tomato	extracellular	33.53	29.63
CDY36415	Canola	extracellular	34.73	29.59
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.33	29.5
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.73	29.44
Bra012981.1-P	Field mustard	extracellular, vacuole	38.92	29.28
CDX69983	Canola	extracellular	37.13	29.25
Bra009313.1-P	Field mustard	extracellular	37.13	29.25
KRH75030	Soybean	extracellular	37.13	28.84
KRH56823	Soybean	extracellular	36.53	28.64
Bra019700.1-P	Field mustard	extracellular	33.53	28.43
PGSC0003DMT400072939	Potato	extracellular	34.73	28.16
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	32.93	28.06
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.93	28.06
TraesCS5A01G390800.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	23.35	28.06
CDY65205	Canola	plasma membrane	32.93	27.78
CDX99038	Canola	extracellular	38.92	27.66
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	32.34	27.41
AT5G08000.2	Thale cress	extracellular	34.73	27.23
TraesCS5A01G548300.1	Wheat	plasma membrane	31.74	27.04
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	28.74	26.97
TraesCS1A01G332500.1	Wheat	extracellular	33.53	26.79
KRH70882	Soybean	extracellular	34.73	26.73
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	33.53	26.54
CDY07353	Canola	extracellular	34.13	26.15
Bra004003.1-P	Field mustard	extracellular	34.13	26.15
TraesCS2A01G252300.1	Wheat	extracellular	26.95	26.01
CDY04273	Canola	extracellular	33.53	25.69
CDY54140	Canola	extracellular	31.14	24.88
CDY50312	Canola	extracellular	31.14	24.19
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.93	23.21
AT1G69295.1	Thale cress	extracellular	30.54	22.97
Bra038314.1-P	Field mustard	mitochondrion	29.94	22.12
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.53	20.82
Solyc04g005420.2.1	Tomato	extracellular, vacuole	34.13	18.57
CDY47016	Canola	extracellular	37.72	16.94
TraesCS7A01G481700.1	Wheat	extracellular	21.56	16.44
TraesCS3A01G227300.1	Wheat	extracellular	32.34	16.22
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	27.54	13.94
TraesCS2A01G425000.1	Wheat	plastid	29.34	13.57
TraesCS4A01G358500.1	Wheat	extracellular	30.54	12.44
TraesCS5A01G365000.1	Wheat	extracellular	24.55	8.86

Protein Annotations

EnsemblPlants:TraesCS5A01G393200.1	EnsemblPlantsGene:TraesCS5A01G393200	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5A:-:589060597..589062401

Molecular Weight (calculated)

17029.2 Da

IEP (calculated)

7.093

GRAVY (calculated)

0.173

Length

167 amino acids

Sequence
(BLAST)

001: MASHAARLLL LLALAAALAG RSDGAWCVCR TDLPDATLQR TLDYACGSAA DCKPIQPNAT CFAPDTVKAH CSYAVNSYYQ RSGQNPLACV FSNTAVISST
101: DPSTNGCKYP ASATPSAPGS PPPPMAQGPN GDLKDTSGGA DVFPVAGAAT RAVILACCSL LALYFIA

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.