CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07353	Canola	extracellular	81.43	88.53
CDY04273	Canola	extracellular	81.01	88.07
CDY54140	Canola	extracellular	74.26	84.21
CDY50312	Canola	extracellular	75.11	82.79
AT1G69295.1	Thale cress	extracellular	77.22	82.43
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	57.81	69.9
CDY65205	Canola	plasma membrane	56.96	68.18
CDX96707	Canola	extracellular	33.76	43.24
CDX83826	Canola	extracellular	33.33	42.93
GSMUA_Achr4P23440_001	Banana	cytosol	26.58	42.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	32.91	40.84
CDY26741	Canola	extracellular	31.65	40.32
CDY16114	Canola	extracellular	30.38	40.22
CDY33795	Canola	extracellular	30.38	40.22
CDY65418	Canola	cytosol	24.89	40.14
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	32.49	40.1
CDY19232	Canola	extracellular	31.65	39.89
PGSC0003DMT400072939	Potato	extracellular	34.6	39.81
GSMUA_Achr9P07140_001	Banana	extracellular	31.22	39.78
Solyc05g012380.2.1	Tomato	extracellular	33.76	39.6
CDX74636	Canola	extracellular	19.83	39.5
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	29.54	38.89
CDY02987	Canola	extracellular	26.16	38.51
CDY51213	Canola	extracellular	26.16	38.51
PGSC0003DMT400003054	Potato	extracellular	30.8	38.22
EER97492	Sorghum	extracellular	31.22	38.14
GSMUA_Achr7P26650_001	Banana	extracellular	18.57	37.93
CDY47296	Canola	extracellular	18.99	37.82
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.22	37.37
Os07t0600700-01	Rice	extracellular	30.38	37.11
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.8	37.06
GSMUA_Achr5P08900_001	Banana	extracellular	29.54	36.84
GSMUA_Achr8P28170_001	Banana	extracellular	24.05	36.77
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.38	36.73
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	29.11	36.7
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	30.38	36.55
Solyc01g010310.2.1	Tomato	extracellular	29.11	36.51
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.11	36.32
CDY16115	Canola	extracellular	23.63	36.13
CDY34558	Canola	extracellular	26.16	36.05
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.54	35.35
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.38	35.12
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	31.22	35.07
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.54	35.0
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	29.11	34.67
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	29.11	34.67
TraesCS1A01G332500.1	Wheat	extracellular	30.38	34.45
CDX96880	Canola	extracellular	24.89	34.3
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	28.69	34.0
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	29.96	33.97
CDY42854	Canola	extracellular	27.85	33.85
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	28.27	33.84
CDY36415	Canola	extracellular	27.85	33.67
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.8	33.64
TraesCS5B01G398000.1	Wheat	extracellular	23.21	33.54
CDX98134	Canola	extracellular	27.0	33.51
TraesCS5D01G403000.1	Wheat	extracellular	23.21	33.13
TraesCS5A01G393200.1	Wheat	extracellular	23.21	32.93
TraesCS5B01G399400.1	Wheat	extracellular	21.94	32.91
TraesCS3A01G302400.1	Wheat	extracellular	27.0	32.65
TraesCS3D01G299600.1	Wheat	extracellular	27.0	32.65
CDX87201	Canola	extracellular	27.0	32.16
CDY16822	Canola	extracellular	27.0	32.16
Os03t0756300-01	Rice	extracellular	23.63	32.0
CDY02169	Canola	extracellular	26.16	31.96
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	16.88	31.75
CDY23085	Canola	extracellular, plasma membrane, vacuole	25.74	31.61
CDY05067	Canola	endoplasmic reticulum, extracellular	16.46	31.45
Os01t0763900-01	Rice	extracellular	27.0	30.92
CDY72034	Canola	endoplasmic reticulum, extracellular	15.61	30.58
CDY01142	Canola	extracellular	24.05	30.16
CDY47357	Canola	endoplasmic reticulum, extracellular	23.63	29.95
CDX90730	Canola	endoplasmic reticulum, extracellular	15.61	29.6
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	29.96	29.22
CDX69983	Canola	extracellular	25.74	28.77
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	22.78	28.72
Os05t0512600-01	Rice	extracellular	27.43	28.51
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	27.0	28.32
OQU87600	Sorghum	extracellular	22.36	28.19
CDY56715	Canola	cytosol	13.08	27.43
CDX99038	Canola	extracellular	26.16	26.38
EES18492	Sorghum	extracellular	25.32	26.2
Zm00001d010728_P005	Maize	extracellular	24.05	26.03
Zm00001d038682_P001	Maize	extracellular	24.89	25.65
Zm00001d013250_P003	Maize	extracellular	23.21	24.55
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.3	24.12
CDX97778	Canola	extracellular	23.21	24.02
CDY29629	Canola	extracellular	23.21	24.02
CDY21992	Canola	cytosol	14.35	23.94
CDY48582	Canola	cytosol	14.35	23.94
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	27.43	23.64
HORVU2Hr1G033470.1	Barley	cytosol, plastid	29.11	23.23
CDY56240	Canola	extracellular	16.88	23.12
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.3	22.91
CDY70929	Canola	extracellular	16.88	22.22
HORVU3Hr1G074010.3	Barley	cytosol, plastid	27.0	21.99
TraesCS5A01G548300.1	Wheat	plasma membrane	17.72	21.43
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	21.94	21.31
CDX99818	Canola	extracellular	26.16	21.02
CDX94970	Canola	plastid	26.16	20.95
CDY64750	Canola	endoplasmic reticulum, vacuole	26.58	20.93
KXG37528	Sorghum	mitochondrion	22.78	20.38
CDY43335	Canola	extracellular	25.32	20.34
CDY48334	Canola	vacuole	25.74	19.43
HORVU5Hr1G096090.6	Barley	plastid	18.57	18.8
CDX90189	Canola	extracellular	24.89	18.79
CDY31085	Canola	plastid	27.0	18.23
CDY32184	Canola	vacuole	27.0	18.13
CDY47016	Canola	extracellular	28.27	18.01
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	16.46	12.46
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	17.3	10.65
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	17.3	10.54
CDY37850	Canola	vacuole	16.46	10.26
CDY43577	Canola	vacuole	16.46	10.21

Protein Annotations

EnsemblPlants:CDY40909	EnsemblPlantsGene:GSBRNA2T00071957001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
ProteinID:CDY40909	ProteinID:CDY40909.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI0004EB044A
UniProt:A0A078HU68	MapMan:35.1	:	:	:	:

Description

BnaC06g30470DBnaC06g30470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU68]

Coordinates

chrLK032484:-:67754..69716

Molecular Weight (calculated)

23271.0 Da

IEP (calculated)

5.697

GRAVY (calculated)

-0.123

Length

237 amino acids

Sequence
(BLAST)

001: MSVLLPLCLV LSMITYSNAA YCVCKDGNEQ VLQKAIDYAC GAGADCSQIQ QNGACFQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAV ISSSPPSTAS
101: SCLTGSSSSG TPSTGTPTTG TPSTGTPTTG TPSTGTPTTG TPSTGTPTTG TPSTGTPTTG TPTSGFPSTG TPSTGMPNSG TPANGMPTSS SSSVFPGTTL
201: GPTGSGGFGD PNAGEKISVR TNTAFFLLTG LAIMLVV

Best Arabidopsis Sequence Match ( AT1G26450.1 )
(BLAST)

001: MAVLLPLFLL SFMFTYSNAA VCVCKDANEL DLQKVIDFAC GGGADCAQIQ TTGACYQPNT LKNHCDVAVN SYYQKKASTG ATCDFNGAAV ISTSPPSTTS
101: SCLSSSSSNG TPTAGYPSTG NSTTASPGTT NPSTGNSTNS TLPTNDKPTS STITFPDSTT MGPSSSTSGD PNGGEELSVR TTTIILLTTI AAVALRV

Arabidopsis Description

Carbohydrate-binding X8 domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZD0]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.