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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400072939 Potato extracellular 92.08 90.29
Solyc01g010310.2.1 Tomato extracellular 53.96 57.67
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 43.07 45.55
GSMUA_Achr4P23440_001 Banana cytosol 33.66 45.33
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 42.57 44.79
GSMUA_Achr9P07140_001 Banana extracellular 40.59 44.09
GSMUA_Achr5P08900_001 Banana extracellular 40.59 43.16
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 38.12 42.78
GSMUA_Achr7P26650_001 Banana extracellular 24.26 42.24
Solyc03g115200.2.1 Tomato extracellular 38.12 41.18
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 39.6 40.82
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 39.6 40.82
EER97492 Sorghum extracellular 39.11 40.72
GSMUA_Achr8P28170_001 Banana extracellular 31.19 40.65
CDY65205 Canola plasma membrane 39.11 39.9
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.12 38.89
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.12 38.5
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 37.62 38.38
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.61 38.05
CDY54140 Canola extracellular 38.61 37.32
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 36.63 37.19
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 36.63 37.19
Os07t0600700-01 Rice extracellular 35.64 37.11
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 36.14 37.06
TraesCS5D01G403000.1 Wheat extracellular 30.2 36.75
CDY07353 Canola extracellular 39.6 36.7
Bra004003.1-P Field mustard extracellular 39.6 36.7
TraesCS5B01G398000.1 Wheat extracellular 29.7 36.59
TraesCS5A01G393200.1 Wheat extracellular 30.2 36.53
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.16 36.32
CDY50312 Canola extracellular 38.61 36.28
CDY04273 Canola extracellular 39.11 36.24
TraesCS5B01G399400.1 Wheat extracellular 28.22 36.08
AT1G69295.1 Thale cress extracellular 39.6 36.04
Os03t0756300-01 Rice extracellular 31.19 36.0
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.15 35.86
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 32.67 35.11
Solyc07g047710.2.1 Tomato extracellular 19.8 35.09
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.16 35.03
OQU87600 Sorghum extracellular 32.18 34.57
Solyc04g005420.2.1 Tomato extracellular, vacuole 52.48 34.53
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 33.66 34.52
Solyc11g012580.1.1 Tomato extracellular 19.8 34.19
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 31.68 34.04
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 39.6 33.76
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 34.16 32.7
TraesCS3D01G299600.1 Wheat extracellular 31.68 32.65
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 31.68 32.65
HORVU4Hr1G028360.1 Barley peroxisome, plastid 20.3 32.54
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 33.66 32.54
Os05t0512600-01 Rice extracellular 36.63 32.46
Bra038314.1-P Field mustard mitochondrion 36.14 32.3
TraesCS3A01G302400.1 Wheat extracellular 31.19 32.14
TraesCS1A01G332500.1 Wheat extracellular 33.17 32.06
Zm00001d010728_P005 Maize extracellular 34.65 31.96
Os01t0763900-01 Rice extracellular 32.67 31.88
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.16 31.8
EES18492 Sorghum extracellular 35.15 31.0
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 30.69 31.0
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 37.13 30.86
Zm00001d038682_P001 Maize extracellular 33.17 29.13
Zm00001d013250_P003 Maize extracellular 31.68 28.57
Solyc09g091920.2.1 Tomato endoplasmic reticulum, extracellular 27.72 28.43
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 31.19 27.88
Solyc04g058080.2.1 Tomato extracellular 24.26 27.53
HORVU2Hr1G033470.1 Barley cytosol, plastid 40.1 27.27
Solyc12g098410.1.1 Tomato endoplasmic reticulum, extracellular 26.24 26.77
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 31.68 26.23
TraesCS5A01G548300.1 Wheat plasma membrane 24.75 25.51
KXG37528 Sorghum mitochondrion 32.67 24.91
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 32.67 24.0
Solyc02g071200.2.1 Tomato extracellular 33.17 22.11
Solyc07g056310.2.1 Tomato extracellular 26.73 21.86
HORVU5Hr1G096090.6 Barley plastid 25.25 21.79
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 24.26 21.78
HORVU3Hr1G074010.3 Barley cytosol, plastid 31.19 21.65
Solyc05g016390.2.1 Tomato endoplasmic reticulum, extracellular 24.26 18.99
Solyc01g101120.2.1 Tomato endoplasmic reticulum, golgi 27.23 14.99
Solyc12g017360.1.1 Tomato cytosol, peroxisome, plastid 20.79 14.24
Protein Annotations
MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247
GO:GO:0046658UniProt:K4BXW1PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF237SMART:SM00768
SignalP:SignalP-noTMEnsemblPlantsGene:Solyc05g012380.2EnsemblPlants:Solyc05g012380.2.1UniParc:UPI0002765696InterPro:X8SEG:seg
Description
No Description!
Coordinates
chr5:-:5639430..5642259
Molecular Weight (calculated)
20370.7 Da
IEP (calculated)
6.196
GRAVY (calculated)
-0.029
Length
202 amino acids
Sequence
(BLAST)
001: MAAFVLSLIL LLALTGYSSG ANYCVCKDGF ADTLLQHNID YACGNGADCT GILQNGPCYN PNTIKDHCSY AVNSYYQRKA STGATCDFSG TASLTSTPPA
101: SSSSACYQTT GGSTGGTTTP NAPGTTTNPG IGTGTSTGTG IGTGTGTGTN TGINNPTFGM GPTGSGGFNP DGSGTEALHQ NRVFITMALL FTSSFLMVCL
201: RI
Best Arabidopsis Sequence Match ( AT1G69295.1 )
(BLAST)
001: MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI
Arabidopsis Description
PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.