Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011608 | Potato | mitochondrion | 88.38 | 93.09 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 31.82 | 45.0 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 40.91 | 41.12 |
| KRH58889 | Soybean | endoplasmic reticulum, extracellular | 39.39 | 40.84 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 37.88 | 40.11 |
| KRH42801 | Soybean | extracellular | 38.89 | 40.1 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 36.36 | 39.56 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 36.36 | 39.56 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 36.36 | 39.56 |
| CDY01142 | Canola | extracellular | 36.87 | 38.62 |
| EES05109 | Sorghum | extracellular, plasma membrane | 37.37 | 38.54 |
| Zm00001d050544_P001 | Maize | extracellular | 36.36 | 38.5 |
| Zm00001d016545_P001 | Maize | extracellular | 35.86 | 37.97 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 34.85 | 37.5 |
| Solyc07g047710.2.1 | Tomato | extracellular | 20.71 | 35.96 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 31.82 | 35.2 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 37.88 | 34.09 |
| Bra032719.1-P | Field mustard | endoplasmic reticulum, extracellular | 35.35 | 33.82 |
| Solyc11g012580.1.1 | Tomato | extracellular | 19.19 | 32.48 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.87 | 31.6 |
| Solyc04g058080.2.1 | Tomato | extracellular | 25.76 | 28.65 |
| Solyc03g115200.2.1 | Tomato | extracellular | 26.77 | 28.34 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 36.87 | 27.24 |
| Solyc05g012380.2.1 | Tomato | extracellular | 26.77 | 26.24 |
| Solyc01g010310.2.1 | Tomato | extracellular | 23.74 | 24.87 |
| Solyc07g056310.2.1 | Tomato | extracellular | 28.79 | 23.08 |
| Solyc02g071200.2.1 | Tomato | extracellular | 31.82 | 20.79 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 21.21 | 18.67 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 28.79 | 18.57 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 20.71 | 15.89 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 20.71 | 13.9 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 24.75 | 13.35 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0030246 |
| GO:GO:0030247 | GO:GO:0046658 | UniProt:K4DHL4 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 |
| SMART:SM00768 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc12g098410.1 | EnsemblPlants:Solyc12g098410.1.1 | TMHMM:TMhelix | UniParc:UPI000276A1F2 |
| InterPro:X8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:65923983..65925707
Molecular Weight (calculated)
21467.5 Da
IEP (calculated)
7.293
GRAVY (calculated)
-0.017
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MFMEVLVVIV MMLTIIVRTK ATWCVVRSDA SYQALQRGLD YACSYGADCS PIQSTGLCYL PNTIQNHASY AFNSYYQRNN MAPGSCQFAG TATFAKTDPS
101: YGSCVYPASP RAAGGPLPPG IGGHNDTGGG VTTTPVLYSP PQAIINPVYA NRTTPITAES SDPDSQDSKA STYPKFWSMT SLIATYLMFH LVYNFQFL
101: YGSCVYPASP RAAGGPLPPG IGGHNDTGGG VTTTPVLYSP PQAIINPVYA NRTTPITAES SDPDSQDSKA STYPKFWSMT SLIATYLMFH LVYNFQFL
001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.