Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 6
- vacuole 5
- plastid 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 91.11 | 59.25 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 41.78 | 54.02 |
| KRH55823 | Soybean | extracellular | 41.33 | 53.45 |
| KRH25694 | Soybean | extracellular | 40.89 | 53.18 |
| KRH27014 | Soybean | extracellular | 36.89 | 47.43 |
| GSMUA_Achr10P... | Banana | extracellular | 36.44 | 46.33 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 35.56 | 44.94 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 35.11 | 44.38 |
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 34.67 | 43.82 |
| OQU76517 | Sorghum | extracellular | 33.78 | 43.68 |
| Bra003318.1-P | Field mustard | extracellular | 32.89 | 43.53 |
| CDY56240 | Canola | extracellular | 33.33 | 43.35 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.44 | 42.94 |
| Zm00001d046155_P001 | Maize | extracellular | 33.33 | 42.61 |
| Os06t0537700-01 | Rice | extracellular | 35.11 | 42.47 |
| KRH22312 | Soybean | extracellular | 34.22 | 42.08 |
| CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 31.11 | 39.11 |
| Bra004688.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 31.11 | 38.89 |
| CDY70929 | Canola | extracellular | 30.67 | 38.33 |
| Solyc07g047710.2.1 | Tomato | extracellular | 19.11 | 37.72 |
| HORVU0Hr1G021440.2 | Barley | plastid | 25.33 | 36.08 |
| Solyc11g012580.1.1 | Tomato | extracellular | 18.22 | 35.04 |
| AT3G58100.2 | Thale cress | cytosol | 34.67 | 30.47 |
| Solyc04g058080.2.1 | Tomato | extracellular | 22.67 | 28.65 |
| Solyc03g115200.2.1 | Tomato | extracellular | 20.89 | 25.13 |
| Solyc05g012380.2.1 | Tomato | extracellular | 21.78 | 24.26 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 20.44 | 23.35 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 18.67 | 21.21 |
| Solyc01g010310.2.1 | Tomato | extracellular | 17.33 | 20.63 |
| Solyc07g056310.2.1 | Tomato | extracellular | 21.33 | 19.43 |
| Solyc02g071200.2.1 | Tomato | extracellular | 24.0 | 17.82 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 26.22 | 16.08 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 18.22 | 15.89 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 18.67 | 14.24 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 19.11 | 14.01 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4CFP0 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g053430.2 | EnsemblPlants:Solyc07g053430.2.1 | UniParc:UPI000276BE2E | InterPro:X8 | SEG:seg |
Description
PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Source:Projected from Arabidopsis thaliana (AT3G58100) UniProtKB/Swiss-Prot;Acc:Q9M2K6]
Coordinates
chr7:-:61867623..61871410
Molecular Weight (calculated)
22292.9 Da
IEP (calculated)
4.718
GRAVY (calculated)
-0.037
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLKFSFSLL LFSLISTLST AQFGGTGSAP GGTGTTPAGT GSTPGGTVTS PSGVGSAPGG TTAAPGGTSA APAGGTATGG GGGATVELWC VAKNNAEDTA
101: LQSALDWACG PGGANCGPIQ PGGPCYDPKD IQKTASYVFN DYFIKHGMTE DACNFDDNAA LISINPSHNG CKFPSSKNSS GSPSGSTNGG LSPSSEDLSS
201: GSSILRRWMY ILMAINLLFA SQLIF
101: LQSALDWACG PGGANCGPIQ PGGPCYDPKD IQKTASYVFN DYFIKHGMTE DACNFDDNAA LISINPSHNG CKFPSSKNSS GSPSGSTNGG LSPSSEDLSS
201: GSSILRRWMY ILMAINLLFA SQLIF
001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.