Factsheet for Bra004688.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	98.89	99.44
Bra003318.1-P	Field mustard	extracellular	53.89	57.06
VIT_12s0028g02540.t01	Wine grape	extracellular	42.22	43.68
KRH25694	Soybean	extracellular	39.44	41.04
KRH27014	Soybean	extracellular	39.44	40.57
KRH55823	Soybean	extracellular	38.89	40.23
GSMUA_Achr10P...	Banana	extracellular	39.44	40.11
Zm00001d046155_P001	Maize	extracellular	37.78	38.64
OQU76517	Sorghum	extracellular	36.67	37.93
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	37.22	37.64
TraesCS7D01G332800.1	Wheat	plasma membrane	36.67	37.08
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	36.67	37.08
KRH22312	Soybean	extracellular	37.22	36.61
Os06t0537700-01	Rice	extracellular	37.22	36.02
Bra034233.1-P	Field mustard	cytosol	21.11	34.55
Bra035382.1-P	Field mustard	extracellular	21.11	31.93
Solyc07g053430.2.1	Tomato	endoplasmic reticulum, extracellular	38.89	31.11
HORVU0Hr1G021440.2	Barley	plastid	26.11	29.75
Bra026878.1-P	Field mustard	extracellular	18.89	24.11
Bra025116.1-P	Field mustard	extracellular	21.11	23.6
Bra026879.1-P	Field mustard	extracellular	18.33	23.24
Bra029334.1-P	Field mustard	extracellular	24.44	22.56
Bra026880.1-P	Field mustard	extracellular	22.22	22.35
Bra016724.1-P	Field mustard	extracellular	21.11	22.09
Bra009313.1-P	Field mustard	extracellular	25.56	21.7
Bra035941.1-P	Field mustard	extracellular	23.33	21.11
PGSC0003DMT400024290	Potato	extracellular, vacuole	38.89	20.23
Bra004003.1-P	Field mustard	extracellular	24.44	20.18
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	21.11	19.39
Bra019700.1-P	Field mustard	extracellular	21.11	19.29
Bra012981.1-P	Field mustard	extracellular, vacuole	22.78	18.47
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	20.0	17.39
Bra038314.1-P	Field mustard	mitochondrion	21.67	17.26
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	26.67	16.27
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	27.22	16.23
Bra010831.1-P	Field mustard	nucleus	25.56	15.97
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	26.67	15.64
Bra032314.1-P	Field mustard	plastid	27.78	13.19
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	17.78	9.91
Bra031835.1-P	Field mustard	vacuole	20.0	9.5
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	17.78	8.18

Protein Annotations

EnsemblPlants:Bra004688.1	EnsemblPlants:Bra004688.1-P	EnsemblPlantsGene:Bra004688	Gene3D:1.20.58.1040	InterPro:X8	PANTHER:PTHR32227
PANTHER:PTHR32227:SF98	PFAM:PF07983	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI00025478A0
UniProt:M4CKF3	MapMan:35.1	:	:	:	:

Description

AT3G58100 (E=3e-051) PDCB5 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding

Coordinates

chrA05:-:1362941..1363797

Molecular Weight (calculated)

19303.5 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.108

Length

180 amino acids

Sequence
(BLAST)

001: MIGYTPSQFH FHYLLMHLSL VITLTSAQFG GQASETDLWC VAKNNAEDSS LQAAIDWACG PGGTDCAGIQ QGGPCYDPSD IVKTASYVFN SYYLKNGPED
101: EACNFSNSAA VTSLNPSQGT CKLPSSKRVS NGNIVDAATT STQGTSTQES SDFNRAGRIF SSIWSLPFII LGLVMINHHF

Best Arabidopsis Sequence Match ( AT3G58100.1 )
(BLAST)

001: MIMSLPQCSH LRLSILAATA AMLMVITTAQ IGGQVIQVEL WCVAKNNAED SSLQTAIEWA CGQGGADCGP IQQGGPCNDP TDVQKMASFV FNNYYLKNGE
101: EDEACNFNNN AALTSLNPSQ GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL

Arabidopsis Description

PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.