Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH27014 | Soybean | extracellular | 80.87 | 84.57 |
KRH25694 | Soybean | extracellular | 48.63 | 51.45 |
KRH55823 | Soybean | extracellular | 48.63 | 51.15 |
VIT_12s0028g02540.t01 | Wine grape | extracellular | 43.17 | 45.4 |
GSMUA_Achr10P... | Banana | extracellular | 38.25 | 39.55 |
OQU76517 | Sorghum | extracellular | 37.16 | 39.08 |
Bra003318.1-P | Field mustard | extracellular | 36.07 | 38.82 |
CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.52 | 38.24 |
TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 37.16 | 38.2 |
Zm00001d046155_P001 | Maize | extracellular | 36.61 | 38.07 |
CDY70929 | Canola | extracellular | 37.16 | 37.78 |
TraesCS7D01G332800.1 | Wheat | plasma membrane | 36.61 | 37.64 |
Os06t0537700-01 | Rice | extracellular | 38.25 | 37.63 |
CDY56240 | Canola | extracellular | 35.52 | 37.57 |
CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 36.61 | 37.43 |
Bra004688.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 36.61 | 37.22 |
TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 36.07 | 37.08 |
KRH51177 | Soybean | extracellular | 21.86 | 34.48 |
Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 42.08 | 34.22 |
KRH54678 | Soybean | extracellular, nucleus | 20.22 | 33.33 |
KRH14105 | Soybean | extracellular | 21.31 | 33.05 |
KRH74013 | Soybean | extracellular | 21.31 | 33.05 |
KRH58890 | Soybean | extracellular | 25.14 | 31.94 |
AT3G58100.2 | Thale cress | cytosol | 39.89 | 28.52 |
HORVU0Hr1G021440.2 | Barley | plastid | 24.04 | 27.85 |
KRH59215 | Soybean | extracellular | 27.32 | 27.62 |
KRH58889 | Soybean | endoplasmic reticulum, extracellular | 25.68 | 24.61 |
KRH42801 | Soybean | extracellular | 24.59 | 23.44 |
KRH31583 | Soybean | extracellular | 24.59 | 23.44 |
PGSC0003DMT400024290 | Potato | extracellular, vacuole | 41.53 | 21.97 |
KRH03122 | Soybean | extracellular, nucleus | 23.5 | 21.18 |
KRH50525 | Soybean | extracellular | 20.77 | 20.77 |
KRH56823 | Soybean | extracellular | 24.04 | 20.66 |
KRG89485 | Soybean | extracellular | 19.67 | 20.45 |
KRH70882 | Soybean | extracellular | 22.4 | 18.89 |
KRH75030 | Soybean | extracellular | 21.86 | 18.6 |
KRH14480 | Soybean | extracellular | 25.68 | 18.29 |
KRG98922 | Soybean | extracellular | 24.59 | 17.58 |
KRH73630 | Soybean | extracellular | 24.59 | 17.44 |
KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 23.5 | 17.41 |
KRH59084 | Soybean | extracellular | 23.5 | 17.13 |
KRH46050 | Soybean | extracellular | 23.5 | 16.8 |
KRH42964 | Soybean | extracellular | 25.14 | 16.67 |
KRH43685 | Soybean | plastid | 19.67 | 14.52 |
KRH12824 | Soybean | extracellular, vacuole | 24.04 | 13.58 |
KRH37784 | Soybean | extracellular | 24.04 | 13.5 |
KRG90034 | Soybean | extracellular, plasma membrane | 20.77 | 12.84 |
KRH77114 | Soybean | extracellular, vacuole | 23.5 | 10.89 |
KRH13771 | Soybean | vacuole | 20.77 | 10.59 |
KRH28365 | Soybean | vacuole | 22.95 | 10.55 |
KRG96680 | Soybean | extracellular | 26.23 | 9.07 |
KRH68400 | Soybean | extracellular | 25.68 | 8.74 |
KRH33760 | Soybean | vacuole | 28.42 | 8.51 |
KRG90471 | Soybean | vacuole | 27.87 | 8.39 |
Protein Annotations
EntrezGene:100796582 | MapMan:35.1 | UniProt:A0A0R0H4Q9 | EMBL:ACUP02008404 | EnsemblPlantsGene:GLYMA_13G292700 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | EnsemblPlants:KRH22312 |
ProteinID:KRH22312 | ProteinID:KRH22312.1 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 |
SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0006EDF203 | InterPro:X8 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:39261955..39263327
Molecular Weight (calculated)
19834.2 Da
IEP (calculated)
6.487
GRAVY (calculated)
0.038
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKREGFALC RFLIIILLWG FVAGDAPGRE VWCVAKNNAE DAALQSAVEW ACGAGGADCG AIHGGGPCFD PSNMQNTASY AFNDYFRKHA ISEENCNFGN
101: NAAITSFNPS FGNCKFPSSL LVNNGSFSGS ASSMGTMSGE DTSGYSGVVW NWRWFSSFIV TTHFLFIVSP SRIVSWRLHL IQN
101: NAAITSFNPS FGNCKFPSSL LVNNGSFSGS ASSMGTMSGE DTSGYSGVVW NWRWFSSFIV TTHFLFIVSP SRIVSWRLHL IQN
001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.