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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 94.44 94.97
CDY56240 Canola extracellular 55.0 57.23
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 53.89 57.06
VIT_12s0028g02540.t01 Wine grape extracellular 42.22 43.68
KRH25694 Soybean extracellular 39.44 41.04
KRH27014 Soybean extracellular 39.44 40.57
KRH55823 Soybean extracellular 38.89 40.23
GSMUA_Achr10P... Banana extracellular 39.44 40.11
Zm00001d046155_P001 Maize extracellular 38.89 39.77
OQU76517 Sorghum extracellular 37.22 38.51
TraesCS7A01G346300.1 Wheat endoplasmic reticulum, plasma membrane 37.78 38.2
TraesCS7B01G236800.1 Wheat endoplasmic reticulum, extracellular 37.22 37.64
TraesCS7D01G332800.1 Wheat plasma membrane 37.22 37.64
KRH22312 Soybean extracellular 37.78 37.16
Os06t0537700-01 Rice extracellular 37.78 36.56
CDY56715 Canola cytosol 22.22 35.4
CDY48582 Canola cytosol 26.11 33.1
CDY21992 Canola cytosol 26.11 33.1
CDX74636 Canola extracellular 20.56 31.09
CDY47296 Canola extracellular 20.56 31.09
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 38.33 30.67
HORVU0Hr1G021440.2 Barley plastid 26.11 29.75
CDX90730 Canola endoplasmic reticulum, extracellular 20.0 28.8
CDY05067 Canola endoplasmic reticulum, extracellular 19.44 28.23
CDY72034 Canola endoplasmic reticulum, extracellular 18.33 27.27
CDY16115 Canola extracellular 21.11 24.52
CDY65418 Canola cytosol 20.0 24.49
CDY02987 Canola extracellular 20.56 22.98
CDY51213 Canola extracellular 20.56 22.98
CDY33795 Canola extracellular 22.22 22.35
CDY01142 Canola extracellular 23.33 22.22
CDY16114 Canola extracellular 21.67 21.79
CDY16822 Canola extracellular 23.89 21.61
CDY34558 Canola extracellular 20.56 21.51
CDX96880 Canola extracellular 20.56 21.51
CDY47357 Canola endoplasmic reticulum, extracellular 22.22 21.39
CDX83826 Canola extracellular 21.67 21.2
CDX87201 Canola extracellular 23.33 21.11
CDX96707 Canola extracellular 21.67 21.08
CDY42854 Canola extracellular 22.78 21.03
CDY29629 Canola extracellular 26.67 20.96
CDX97778 Canola extracellular 26.67 20.96
CDX69983 Canola extracellular 24.44 20.75
CDY19232 Canola extracellular 21.67 20.74
CDY23085 Canola extracellular, plasma membrane, vacuole 22.22 20.73
CDY26741 Canola extracellular 21.11 20.43
CDY02169 Canola extracellular 21.67 20.1
PGSC0003DMT400024290 Potato extracellular, vacuole 38.33 19.94
CDY36415 Canola extracellular 21.67 19.9
CDX98134 Canola extracellular 21.11 19.9
CDY07353 Canola extracellular 23.89 19.72
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 21.11 19.39
CDY65205 Canola plasma membrane 21.11 19.19
CDX99038 Canola extracellular 25.0 19.15
CDY04273 Canola extracellular 22.78 18.81
CDY54140 Canola extracellular 21.67 18.66
CDY50312 Canola extracellular 21.67 18.14
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 22.22 16.88
CDX99818 Canola extracellular 27.22 16.61
CDY43335 Canola extracellular 27.22 16.61
CDY48334 Canola vacuole 27.22 15.61
CDX90189 Canola extracellular 27.22 15.61
CDX94970 Canola plastid 25.56 15.54
CDY64750 Canola endoplasmic reticulum, vacuole 25.56 15.28
CDY31085 Canola plastid 25.56 13.11
CDY32184 Canola vacuole 25.56 13.03
CDY47016 Canola extracellular 22.78 11.02
CDY56795 Canola cytosol, nucleus, plastid, vacuole 17.78 10.22
CDY43577 Canola vacuole 19.44 9.16
CDY37850 Canola vacuole 18.89 8.95
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 17.22 8.05
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 17.22 7.97
Protein Annotations
EnsemblPlants:CDY70929EnsemblPlantsGene:GSBRNA2T00008554001Gene3D:1.20.58.1040InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98
PFAM:PF07983ProteinID:CDY70929ProteinID:CDY70929.1SEG:segSignalP:SignalP-noTMSMART:SM00768
UniParc:UPI0004EE3A76UniProt:A0A078JVZ4MapMan:35.1:::
Description
BnaC04g52820DBnaC04g52820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVZ4]
Coordinates
chrLK043775:-:1674..2552
Molecular Weight (calculated)
19343.5 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.137
Length
180 amino acids
Sequence
(BLAST)
001: MIGYTPSQFH FHYLLMHLSL VTTVTTAQFN GQASETDLWC VAKNNAEDSA LQAAIDWACG PGGTDCAGIQ QGGPCYDPSD IVKTASYVFN NYYLKNGPED
101: EACNFSNSAA VTSLNPSQGT CKLPSSKRVS NGNIVDAATT STQGTTAQES SDFNRAGRIF SSIWSLPFII LGLVMINHHF
Best Arabidopsis Sequence Match ( AT3G58100.1 )
(BLAST)
001: MIMSLPQCSH LRLSILAATA AMLMVITTAQ IGGQVIQVEL WCVAKNNAED SSLQTAIEWA CGQGGADCGP IQQGGPCNDP TDVQKMASFV FNNYYLKNGE
101: EDEACNFNNN AALTSLNPSQ GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.