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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90730 Canola endoplasmic reticulum, extracellular 91.94 91.2
CDY72034 Canola endoplasmic reticulum, extracellular 88.71 90.91
KRH51177 Soybean extracellular 42.74 45.69
CDX74636 Canola extracellular 43.55 45.38
CDY47296 Canola extracellular 43.55 45.38
GSMUA_Achr11P... Banana extracellular 43.55 45.38
KRH14105 Soybean extracellular 42.74 44.92
Solyc11g012580.1.1 Tomato extracellular 41.13 43.59
KRH74013 Soybean extracellular 41.13 43.22
PGSC0003DMT400034582 Potato extracellular 40.32 43.1
Solyc07g047710.2.1 Tomato extracellular 39.52 42.98
PGSC0003DMT400015724 Potato extracellular 39.52 42.98
VIT_12s0057g00700.t01 Wine grape extracellular 40.32 42.73
AT2G04910.1 Thale cress extracellular 41.94 41.94
GSMUA_Achr9P09230_001 Banana extracellular 39.52 40.5
TraesCS5D01G400600.1 Wheat endoplasmic reticulum, extracellular, mitochondrion, nucleus 39.52 35.25
TraesCS5B01G395600.1 Wheat cytosol, extracellular, mitochondrion, plastid 38.71 35.04
TraesCS5A01G390800.1 Wheat endoplasmic reticulum, extracellular, mitochondrion, nucleus 37.1 33.09
CDY56715 Canola cytosol 29.84 32.74
HORVU5Hr1G095450.3 Barley extracellular 34.68 32.33
CDY48582 Canola cytosol 30.65 26.76
CDY21992 Canola cytosol 30.65 26.76
CDY01142 Canola extracellular 33.87 22.22
CDY47357 Canola endoplasmic reticulum, extracellular 33.06 21.93
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 29.84 21.76
CDY56240 Canola extracellular 29.03 20.81
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 29.84 20.67
CDY70929 Canola extracellular 28.23 19.44
CDY29629 Canola extracellular 34.68 18.78
CDX97778 Canola extracellular 34.68 18.78
CDY16115 Canola extracellular 23.39 18.71
CDY65205 Canola plasma membrane 29.84 18.69
CDY54140 Canola extracellular 31.45 18.66
CDY16822 Canola extracellular 29.84 18.59
CDX87201 Canola extracellular 29.84 18.59
CDX83826 Canola extracellular 27.42 18.48
CDX96707 Canola extracellular 27.42 18.38
CDY50312 Canola extracellular 31.45 18.14
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 28.23 17.86
CDY23085 Canola extracellular, plasma membrane, vacuole 27.42 17.62
CDY02169 Canola extracellular 27.42 17.53
CDY07353 Canola extracellular 30.65 17.43
CDY04273 Canola extracellular 30.65 17.43
CDY26741 Canola extracellular 25.81 17.2
CDY19232 Canola extracellular 25.81 17.02
CDY42854 Canola extracellular 26.61 16.92
CDY51213 Canola extracellular 21.77 16.77
CDY02987 Canola extracellular 21.77 16.77
CDY33795 Canola extracellular 24.19 16.76
CDY16114 Canola extracellular 24.19 16.76
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 31.45 16.46
CDX69983 Canola extracellular 27.42 16.04
CDY34558 Canola extracellular 21.77 15.7
CDY65418 Canola cytosol 18.55 15.65
CDY36415 Canola extracellular 24.19 15.31
CDY43335 Canola extracellular 36.29 15.25
CDX94970 Canola plastid 36.29 15.2
CDX98134 Canola extracellular 23.39 15.18
CDX96880 Canola extracellular 20.97 15.12
CDY64750 Canola endoplasmic reticulum, vacuole 36.29 14.95
CDX99038 Canola extracellular 28.23 14.89
CDX99818 Canola extracellular 34.68 14.58
CDX90189 Canola extracellular 36.29 14.33
CDY48334 Canola vacuole 35.48 14.01
CDY56795 Canola cytosol, nucleus, plastid, vacuole 32.26 12.78
CDY31085 Canola plastid 34.68 12.25
CDY32184 Canola vacuole 34.68 12.18
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 32.26 10.39
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 32.26 10.28
CDY37850 Canola vacuole 31.45 10.26
CDY43577 Canola vacuole 31.45 10.21
CDY47016 Canola extracellular 26.61 8.87
Protein Annotations
EnsemblPlants:CDY05067EnsemblPlantsGene:GSBRNA2T00119828001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98PFAM:PF07983
ProteinID:CDY05067ProteinID:CDY05067.1SEG:segSignalP:SignalP-noTMSMART:SM00768TMHMM:TMhelix
UniParc:UPI0004EE2E6AMapMan:35.1::::
Description
BnaC03g28650D
Coordinates
chrLK031959:+:411788..413517
Molecular Weight (calculated)
13600.0 Da
IEP (calculated)
6.891
GRAVY (calculated)
-0.169
Length
124 amino acids
Sequence
(BLAST)
001: MAIKNSFSLL LSSLMVFALI VIPTISGNPS GTWCVANPKI QDQVVQAALG WACQQSQAYC SRIQLGQNCY SPNTLRDHAS VVFNTYYQHN KDQGGSCDFN
101: RAAVITHTDP SHDTCQFESV PDSK
Best Arabidopsis Sequence Match ( AT2G04910.2 )
(BLAST)
001: MGYLIFVAKA EFGQWCVADG QIPDNVIQAA VDWACQTGGA DCSTIQPNQP CFLPNTVKDH ASVVFNNYYQ RYKRNGGSCN FNSTAFITQT DPSHDSCHFE
101: YVPF
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SI35]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.