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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004003.1-P Field mustard extracellular 98.62 98.62
CDY07353 Canola extracellular 98.62 98.62
CDY54140 Canola extracellular 81.19 84.69
CDY50312 Canola extracellular 81.65 82.79
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 88.07 81.01
AT1G69295.1 Thale cress extracellular 81.19 79.73
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 62.39 69.39
CDY65205 Canola plasma membrane 61.47 67.68
GSMUA_Achr4P23440_001 Banana cytosol 30.28 44.0
CDY65418 Canola cytosol 27.98 41.5
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 36.24 41.36
EER97492 Sorghum extracellular 36.24 40.72
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 35.78 40.62
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 33.49 40.56
CDX96707 Canola extracellular 34.4 40.54
GSMUA_Achr9P07140_001 Banana extracellular 34.4 40.32
PGSC0003DMT400072939 Potato extracellular 38.07 40.29
CDX83826 Canola extracellular 33.95 40.22
CDY16114 Canola extracellular 32.57 39.66
CDY33795 Canola extracellular 32.57 39.66
CDY26741 Canola extracellular 33.49 39.25
CDY02987 Canola extracellular 28.9 39.13
CDY51213 Canola extracellular 28.9 39.13
Solyc05g012380.2.1 Tomato extracellular 36.24 39.11
GSMUA_Achr5P08900_001 Banana extracellular 33.95 38.95
GSMUA_Achr7P26650_001 Banana extracellular 20.64 38.79
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 34.86 38.58
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.49 38.42
CDY19232 Canola extracellular 33.03 38.3
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 33.03 38.3
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.4 38.27
GSMUA_Achr8P28170_001 Banana extracellular 27.06 38.06
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.4 37.88
CDX74636 Canola extracellular 20.64 37.82
PGSC0003DMT400003054 Potato extracellular 33.03 37.7
Os07t0600700-01 Rice extracellular 33.49 37.63
CDY34558 Canola extracellular 29.36 37.21
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.95 37.19
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 33.95 37.19
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.49 37.06
CDY16115 Canola extracellular 26.15 36.77
Solyc01g010310.2.1 Tomato extracellular 31.65 36.51
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.49 36.5
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 33.03 36.36
CDY47296 Canola extracellular 19.72 36.13
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.49 35.61
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 34.4 35.55
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.57 35.5
CDX96880 Canola extracellular 27.98 35.47
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.11 35.35
Os03t0756300-01 Rice extracellular 27.52 34.29
TraesCS5B01G398000.1 Wheat extracellular 25.69 34.15
TraesCS1A01G332500.1 Wheat extracellular 32.57 33.97
CDY42854 Canola extracellular 30.28 33.85
TraesCS5D01G403000.1 Wheat extracellular 25.69 33.73
CDY36415 Canola extracellular 30.28 33.67
TraesCS5A01G393200.1 Wheat extracellular 25.69 33.53
CDX98134 Canola extracellular 29.36 33.51
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.11 33.49
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.03 33.18
TraesCS3A01G302400.1 Wheat extracellular 29.36 32.65
TraesCS3D01G299600.1 Wheat extracellular 29.36 32.65
CDY23085 Canola extracellular, plasma membrane, vacuole 28.9 32.64
Os01t0763900-01 Rice extracellular 30.73 32.37
TraesCS5B01G399400.1 Wheat extracellular 23.39 32.28
CDX87201 Canola extracellular 29.36 32.16
CDY16822 Canola extracellular 29.36 32.16
CDY02169 Canola extracellular 28.44 31.96
CDY01142 Canola extracellular 27.06 31.22
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 32.11 30.97
CDY05067 Canola endoplasmic reticulum, extracellular 17.43 30.65
CDY47357 Canola endoplasmic reticulum, extracellular 26.15 30.48
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 33.95 30.45
CDX69983 Canola extracellular 29.36 30.19
HORVU4Hr1G028360.1 Barley peroxisome, plastid 17.43 30.16
OQU87600 Sorghum extracellular 25.69 29.79
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 25.69 29.79
CDY72034 Canola endoplasmic reticulum, extracellular 16.51 29.75
Os05t0512600-01 Rice extracellular 30.28 28.95
CDX90730 Canola endoplasmic reticulum, extracellular 16.51 28.8
CDX99038 Canola extracellular 29.82 27.66
CDY56715 Canola cytosol 14.22 27.43
EES18492 Sorghum extracellular 27.52 26.2
Zm00001d010728_P005 Maize extracellular 26.15 26.03
Zm00001d038682_P001 Maize extracellular 27.06 25.65
Zm00001d013250_P003 Maize extracellular 25.69 25.0
HORVU2Hr1G033470.1 Barley cytosol, plastid 33.49 24.58
CDX97778 Canola extracellular 25.23 24.02
CDY29629 Canola extracellular 25.23 24.02
CDY21992 Canola cytosol 15.6 23.94
CDY48582 Canola cytosol 15.6 23.94
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 19.27 23.46
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 29.36 23.27
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 17.89 22.94
CDY70929 Canola extracellular 18.81 22.78
CDY56240 Canola extracellular 17.89 22.54
HORVU3Hr1G074010.3 Barley cytosol, plastid 29.82 22.34
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 24.77 22.13
CDX99818 Canola extracellular 29.36 21.69
KXG37528 Sorghum mitochondrion 25.69 21.13
CDY43335 Canola extracellular 27.98 20.68
CDX94970 Canola plastid 27.98 20.61
TraesCS5A01G548300.1 Wheat plasma membrane 18.35 20.41
CDY48334 Canola vacuole 28.9 20.06
CDY64750 Canola endoplasmic reticulum, vacuole 27.52 19.93
CDX90189 Canola extracellular 27.98 19.43
HORVU5Hr1G096090.6 Barley plastid 20.64 19.23
CDY47016 Canola extracellular 30.28 17.74
CDY31085 Canola plastid 27.98 17.38
CDY32184 Canola vacuole 27.98 17.28
CDY56795 Canola cytosol, nucleus, plastid, vacuole 18.81 13.1
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 19.27 10.91
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 19.27 10.8
CDY37850 Canola vacuole 17.89 10.26
CDY43577 Canola vacuole 17.89 10.21
Protein Annotations
EnsemblPlants:CDY04273EnsemblPlantsGene:GSBRNA2T00118022001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF118PFAM:PF07983
ProteinID:CDY04273ProteinID:CDY04273.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EEEEDA
MapMan:35.1:::::
Description
BnaC06g25420D
Coordinates
chrLK031950:-:851026..852902
Molecular Weight (calculated)
21487.1 Da
IEP (calculated)
5.697
GRAVY (calculated)
-0.016
Length
218 amino acids
Sequence
(BLAST)
001: MSVLLPLCLI ISMIAYSNAA YCVCKDGNEQ VLQKAIDYAC GAGADCTQIQ QNGACYQPNT VKAHCDVAVN SYYQKKASSG ATCDFNGAAI ISTSPPSTAS
101: SCLTGSSSSG TPSTGTPTTG TPNTGTPTSG FPSTGTPSTG TPTTGMPNTG TPSTSTGMPT SGTPTNGMPT SSSSSVFPGT TLGPTGSGGL DPSGGEKISV
201: RTNSVFLLLA GAAIVLVV
Best Arabidopsis Sequence Match ( AT1G69295.1 )
(BLAST)
001: MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI
Arabidopsis Description
PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.