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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50312 Canola extracellular 98.56 95.81
Bra038314.1-P Field mustard mitochondrion 90.91 84.07
CDY07353 Canola extracellular 85.65 82.11
CDY04273 Canola extracellular 84.69 81.19
AT1G69295.1 Thale cress extracellular 79.9 75.23
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 84.21 74.26
CDY65205 Canola plasma membrane 62.68 66.16
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 61.72 65.82
GSMUA_Achr4P23440_001 Banana cytosol 29.67 41.33
PGSC0003DMT400072939 Potato extracellular 38.76 39.32
CDY16114 Canola extracellular 33.49 39.11
CDY33795 Canola extracellular 33.49 39.11
Solyc05g012380.2.1 Tomato extracellular 37.32 38.61
CDX96707 Canola extracellular 33.49 37.84
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 34.45 37.7
CDX83826 Canola extracellular 33.01 37.5
CDY26741 Canola extracellular 33.01 37.1
CDX74636 Canola extracellular 21.05 36.97
CDY16115 Canola extracellular 27.27 36.77
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 31.58 36.67
CDY34558 Canola extracellular 30.14 36.63
GSMUA_Achr9P07140_001 Banana extracellular 32.54 36.56
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 33.49 36.46
CDY19232 Canola extracellular 32.54 36.17
GSMUA_Achr8P28170_001 Banana extracellular 26.79 36.13
EER97492 Sorghum extracellular 33.49 36.08
CDY65418 Canola cytosol 25.36 36.05
PGSC0003DMT400003054 Potato extracellular 32.54 35.6
CDX96880 Canola extracellular 29.19 35.47
CDY02987 Canola extracellular 27.27 35.4
CDY51213 Canola extracellular 27.27 35.4
GSMUA_Achr7P26650_001 Banana extracellular 19.62 35.34
CDY47296 Canola extracellular 20.1 35.29
Solyc01g010310.2.1 Tomato extracellular 31.58 34.92
GSMUA_Achr5P08900_001 Banana extracellular 31.58 34.74
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 31.1 34.57
Os07t0600700-01 Rice extracellular 32.06 34.54
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.06 33.84
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 31.58 33.67
CDX98134 Canola extracellular 30.62 33.51
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 31.58 33.5
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 31.58 33.33
CDY36415 Canola extracellular 31.1 33.16
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.14 33.16
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 31.58 33.0
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 31.1 32.99
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 31.1 32.83
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 31.1 32.66
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 31.1 32.66
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 32.54 32.23
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 31.58 32.2
TraesCS3A01G302400.1 Wheat extracellular 30.14 32.14
TraesCS3D01G299600.1 Wheat extracellular 30.14 32.14
CDY42854 Canola extracellular 29.67 31.79
TraesCS5B01G398000.1 Wheat extracellular 24.88 31.71
TraesCS1A01G332500.1 Wheat extracellular 31.58 31.58
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 30.14 31.5
CDY05067 Canola endoplasmic reticulum, extracellular 18.66 31.45
TraesCS5D01G403000.1 Wheat extracellular 24.88 31.33
TraesCS5A01G393200.1 Wheat extracellular 24.88 31.14
TraesCS5B01G399400.1 Wheat extracellular 23.45 31.01
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 30.62 30.62
CDY72034 Canola endoplasmic reticulum, extracellular 17.7 30.58
CDY23085 Canola extracellular, plasma membrane, vacuole 28.23 30.57
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 31.58 30.41
HORVU4Hr1G028360.1 Barley peroxisome, plastid 18.18 30.16
CDY47357 Canola endoplasmic reticulum, extracellular 26.79 29.95
CDY02169 Canola extracellular 27.75 29.9
Os03t0756300-01 Rice extracellular 24.88 29.71
CDX87201 Canola extracellular 28.23 29.65
CDY16822 Canola extracellular 28.23 29.65
CDY01142 Canola extracellular 26.79 29.63
Os01t0763900-01 Rice extracellular 29.19 29.47
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 31.58 29.2
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 33.49 28.81
CDX90730 Canola endoplasmic reticulum, extracellular 17.22 28.8
CDY56715 Canola cytosol 15.31 28.32
OQU87600 Sorghum extracellular 25.36 28.19
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 25.36 28.19
CDX69983 Canola extracellular 27.75 27.36
Os05t0512600-01 Rice extracellular 29.67 27.19
Zm00001d010728_P005 Maize extracellular 26.32 25.11
CDX99038 Canola extracellular 27.75 24.68
CDX97778 Canola extracellular 26.79 24.45
CDY29629 Canola extracellular 26.79 24.45
EES18492 Sorghum extracellular 26.79 24.45
Zm00001d038682_P001 Maize extracellular 26.79 24.35
CDY21992 Canola cytosol 16.27 23.94
CDY48582 Canola cytosol 16.27 23.94
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 19.14 23.53
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 30.62 23.27
CDY56240 Canola extracellular 19.14 23.12
HORVU2Hr1G033470.1 Barley cytosol, plastid 32.06 22.56
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 19.14 22.35
Zm00001d013250_P003 Maize extracellular 23.92 22.32
HORVU3Hr1G074010.3 Barley cytosol, plastid 30.62 21.99
CDY70929 Canola extracellular 18.66 21.67
CDX99818 Canola extracellular 29.67 21.02
CDY43335 Canola extracellular 28.71 20.34
CDX94970 Canola plastid 28.71 20.27
CDY64750 Canola endoplasmic reticulum, vacuole 29.19 20.27
TraesCS5A01G548300.1 Wheat plasma membrane 18.66 19.9
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 22.97 19.67
CDY48334 Canola vacuole 29.19 19.43
KXG37528 Sorghum mitochondrion 24.4 19.25
CDX90189 Canola extracellular 28.71 19.11
CDY31085 Canola plastid 29.67 17.66
CDY32184 Canola vacuole 29.67 17.56
HORVU5Hr1G096090.6 Barley plastid 19.62 17.52
CDY47016 Canola extracellular 30.14 16.94
CDY56795 Canola cytosol, nucleus, plastid, vacuole 18.18 12.14
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 19.14 10.39
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 19.14 10.28
CDY37850 Canola vacuole 18.66 10.26
CDY43577 Canola vacuole 18.66 10.21
Protein Annotations
EnsemblPlants:CDY54140EnsemblPlantsGene:GSBRNA2T00013429001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF118PFAM:PF07983
ProteinID:CDY54140ProteinID:CDY54140.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EE7308
UniProt:A0A078ISP1MapMan:35.1::::
Description
BnaCnng26200DBnaCnng26200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISP1]
Coordinates
chrLK033283:+:10637..12095
Molecular Weight (calculated)
20736.4 Da
IEP (calculated)
6.947
GRAVY (calculated)
-0.005
Length
209 amino acids
Sequence
(BLAST)
001: MSVILPLCLV LSMITSNAAY CVCKDGNEQV LQKAIDYACG AGADCTQIQL NGACYQPNTI KNHCDVAVNS YYQKKASSGA TCDFNGAAVI SSSPPSTASS
101: CLSGSSSSGT PSTGTPKSGT PTTGTPTSGF PSTGTPSTGN PTSGMPNTGT PSTSTGMPTS SSSSVFPGTT LGPVGSGGLG DPNSGVKLSD RTNTVFFLLA
201: GVVMLVMMG
Best Arabidopsis Sequence Match ( AT1G69295.1 )
(BLAST)
001: MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI
Arabidopsis Description
PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.