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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 3
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54140 Canola extracellular 84.07 90.91
CDY50312 Canola extracellular 86.28 90.7
Bra004003.1-P Field mustard extracellular 74.34 77.06
AT1G69295.1 Thale cress extracellular 70.35 71.62
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 53.54 61.73
GSMUA_Achr4P23440_001 Banana cytosol 27.88 42.0
Bra026879.1-P Field mustard extracellular 23.45 37.32
PGSC0003DMT400072939 Potato extracellular 33.63 36.89
Bra026880.1-P Field mustard extracellular 29.2 36.87
Solyc05g012380.2.1 Tomato extracellular 32.3 36.14
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 30.09 35.6
Bra026878.1-P Field mustard extracellular 22.12 35.46
Bra035382.1-P Field mustard extracellular 18.58 35.29
GSMUA_Achr9P07140_001 Banana extracellular 28.76 34.95
Solyc01g010310.2.1 Tomato extracellular 29.2 34.92
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 29.65 34.9
Bra025116.1-P Field mustard extracellular 24.78 34.78
GSMUA_Achr5P08900_001 Banana extracellular 29.2 34.74
PGSC0003DMT400003054 Potato extracellular 29.2 34.55
EER97492 Sorghum extracellular 29.65 34.54
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 26.99 33.89
GSMUA_Achr8P28170_001 Banana extracellular 23.01 33.55
Bra016724.1-P Field mustard extracellular 25.22 33.14
GSMUA_Achr7P26650_001 Banana extracellular 16.81 32.76
Os07t0600700-01 Rice extracellular 27.88 32.47
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 26.99 32.45
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 27.88 31.82
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.88 31.82
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 27.88 31.66
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 27.88 31.66
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 27.43 31.63
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 26.55 31.58
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 27.43 31.47
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.43 31.47
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.43 31.31
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 27.43 31.0
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.43 31.0
TraesCS5B01G398000.1 Wheat extracellular 22.12 30.49
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 28.32 30.33
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.43 30.24
TraesCS5D01G403000.1 Wheat extracellular 22.12 30.12
TraesCS3D01G299600.1 Wheat extracellular 26.11 30.1
TraesCS3A01G302400.1 Wheat extracellular 26.11 30.1
Bra019700.1-P Field mustard extracellular 26.11 29.95
TraesCS5A01G393200.1 Wheat extracellular 22.12 29.94
TraesCS5B01G399400.1 Wheat extracellular 20.8 29.75
Os03t0756300-01 Rice extracellular 23.01 29.71
TraesCS1A01G332500.1 Wheat extracellular 27.43 29.67
HORVU4Hr1G028360.1 Barley peroxisome, plastid 16.37 29.37
Bra029334.1-P Field mustard extracellular 25.22 29.23
Bra034233.1-P Field mustard cytosol 14.16 29.09
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 26.55 28.71
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.43 28.57
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 28.32 28.32
Os01t0763900-01 Rice extracellular 25.66 28.02
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 29.2 27.16
Bra035941.1-P Field mustard extracellular 23.45 26.63
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 22.12 26.6
OQU87600 Sorghum extracellular 21.68 26.06
Os05t0512600-01 Rice extracellular 25.66 25.44
Bra009313.1-P Field mustard extracellular 23.45 25.0
Bra012981.1-P Field mustard extracellular, vacuole 23.01 23.42
Bra003318.1-P Field mustard extracellular 17.26 22.94
Zm00001d010728_P005 Maize extracellular 22.12 22.83
EES18492 Sorghum extracellular 23.01 22.71
Bra032719.1-P Field mustard endoplasmic reticulum, extracellular 20.8 22.71
Zm00001d038682_P001 Maize extracellular 22.57 22.17
Zm00001d013250_P003 Maize extracellular 21.68 21.88
Bra004688.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 17.26 21.67
HORVU2Hr1G033470.1 Barley cytosol, plastid 27.88 21.21
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 25.22 20.73
Bra020023.1-P Field mustard endoplasmic reticulum, vacuole 26.55 20.34
HORVU3Hr1G074010.3 Barley cytosol, plastid 26.11 20.27
Bra030780.1-P Field mustard endoplasmic reticulum, extracellular 27.43 20.2
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 20.8 19.26
Bra010831.1-P Field mustard nucleus 24.34 19.1
Bra021679.1-P Field mustard extracellular, plasma membrane, vacuole 25.22 18.87
KXG37528 Sorghum mitochondrion 22.12 18.87
TraesCS5A01G548300.1 Wheat plasma membrane 15.49 17.86
HORVU5Hr1G096090.6 Barley plastid 17.7 17.09
Bra032314.1-P Field mustard plastid 25.22 15.04
Bra008414.1-P Field mustard cytosol, nucleus, plastid, vacuole 15.93 11.15
Bra035122.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 16.81 9.72
Bra031835.1-P Field mustard vacuole 15.93 9.5
Protein Annotations
EnsemblPlants:Bra038314.1EnsemblPlants:Bra038314.1-PEnsemblPlantsGene:Bra038314InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98
PFAM:PF07983SEG:segSMART:SM00768UniParc:UPI000254669DUniProt:M4FB48MapMan:35.1
Description
AT1G69295 (E=5e-036) PDCB4 | PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4); callose binding / polysaccharide binding
Coordinates
chrA02:-:11328139..11331000
Molecular Weight (calculated)
22426.2 Da
IEP (calculated)
7.915
GRAVY (calculated)
-0.065
Length
226 amino acids
Sequence
(BLAST)
001: MIVRILTPGS GGFHSACFAG YGSGIRRLNA AYCVCKDGNE QVLQKAIDYA CGAGADCTQI QLNGACYQPN TIKNHCDVAV NSYYQKKASS GATCDFNGAA
101: VISNSPPSTA SSCLSGSSSS GTPSTGTPKS GTPSTGTPTS GTPTSGFPST GTPSTGNPTS GMPNTVTPST STGMPTSSSS SVFPGTTLGP VGSGGLGDPN
201: AGVMLSDRTN TVFFILAGVV MLVMMG
Best Arabidopsis Sequence Match ( AT1G69295.2 )
(BLAST)
001: MQLLLVLFCN ICSYAAYCLC KEGNEQVLQK AIDYACGNGA DCTQIQPTGA CYQPNTVKNH CDVAVNSYYQ KKASSGATCD FNGAASPSTT PPSTASNCLT
101: GSSSSGTPTT GTPTTGTPTS GTPTTGTPTT GTPTTGTPTS GTPTSGFPNT GTPNTGTNTG MPNSNGMPTS SSSSVFPGTT LGPTGSGGLG DPNAGEKLSV
201: RTNTVVFLLT GVAAMLVI
Arabidopsis Description
PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.