Factsheet for HORVU3Hr1G074010.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G302400.1	Wheat	extracellular	63.23	93.88
TraesCS3D01G299600.1	Wheat	extracellular	62.89	93.37
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	82.13	86.91
Os01t0763900-01	Rice	extracellular	44.67	62.8
OQU87600	Sorghum	extracellular	39.18	60.64
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	38.83	60.11
KRH54678	Soybean	extracellular, nucleus	20.62	54.05
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	32.99	45.5
GSMUA_Achr7P26650_001	Banana	extracellular	17.18	43.1
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	18.56	42.86
GSMUA_Achr8P28170_001	Banana	extracellular	21.99	41.29
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	26.8	40.62
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	25.77	39.27
PGSC0003DMT400045877	Potato	extracellular	14.43	39.25
GSMUA_Achr9P07140_001	Banana	extracellular	24.74	38.71
GSMUA_Achr5P08900_001	Banana	extracellular	24.74	37.89
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	31.62	37.86
CDX96707	Canola	extracellular	24.05	37.84
AT1G18650.1	Thale cress	extracellular	23.71	37.5
KRH03122	Soybean	extracellular, nucleus	26.12	37.44
Solyc03g115200.2.1	Tomato	extracellular	24.05	37.43
AT5G61130.1	Thale cress	extracellular	25.77	37.31
PGSC0003DMT400063348	Potato	extracellular	23.71	37.3
CDX83826	Canola	extracellular	23.37	36.96
Bra026879.1-P	Field mustard	extracellular	17.87	36.62
CDY26741	Canola	extracellular	23.37	36.56
VIT_01s0011g00570.t01	Wine grape	extracellular	24.05	36.27
Bra035941.1-P	Field mustard	extracellular	24.74	36.18
CDY16822	Canola	extracellular	24.4	35.68
CDY51213	Canola	extracellular	19.59	35.4
CDY23085	Canola	extracellular, plasma membrane, vacuole	23.37	35.23
CDX87201	Canola	extracellular	24.05	35.18
CDY19232	Canola	extracellular	22.68	35.11
CDY02169	Canola	extracellular	23.37	35.05
CDY42854	Canola	extracellular	23.37	34.87
CDY16115	Canola	extracellular	18.56	34.84
Bra025116.1-P	Field mustard	extracellular	19.24	34.78
Bra026878.1-P	Field mustard	extracellular	16.84	34.75
CDY65418	Canola	cytosol	17.53	34.69
CDY16114	Canola	extracellular	21.31	34.64
CDY33795	Canola	extracellular	21.31	34.64
Bra026880.1-P	Field mustard	extracellular	21.31	34.64
PGSC0003DMT400003054	Potato	extracellular	22.68	34.55
Bra029334.1-P	Field mustard	extracellular	23.02	34.36
CDY02987	Canola	extracellular	18.9	34.16
HORVU2Hr1G033470.1	Barley	cytosol, plastid	34.71	34.01
AT2G03505.1	Thale cress	extracellular	19.59	33.93
VIT_17s0000g07260.t01	Wine grape	extracellular	24.05	33.82
KRH56823	Soybean	extracellular	24.4	33.33
KRG89485	Soybean	extracellular	19.93	32.95
Solyc01g010310.2.1	Tomato	extracellular	21.31	32.8
KRH50525	Soybean	extracellular	20.62	32.79
CDX69983	Canola	extracellular	23.02	31.6
Bra009313.1-P	Field mustard	extracellular	23.02	31.6
Solyc05g012380.2.1	Tomato	extracellular	21.65	31.19
PGSC0003DMT400072939	Potato	extracellular	21.99	31.07
Bra016724.1-P	Field mustard	extracellular	18.21	30.81
CDX96880	Canola	extracellular	18.21	30.81
CDY34558	Canola	extracellular	18.21	30.81
Bra012981.1-P	Field mustard	extracellular, vacuole	23.37	30.63
CDY54140	Canola	extracellular	21.99	30.62
CDY07353	Canola	extracellular	22.68	30.28
Bra004003.1-P	Field mustard	extracellular	22.68	30.28
KRH75030	Soybean	extracellular	22.34	30.23
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	20.27	29.95
CDY04273	Canola	extracellular	22.34	29.82
AT5G08000.2	Thale cress	extracellular	21.65	29.58
KRH70882	Soybean	extracellular	21.99	29.49
CDX98134	Canola	extracellular	19.24	29.32
CDY50312	Canola	extracellular	21.65	29.3
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	19.59	29.08
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	19.59	29.08
CDY36415	Canola	extracellular	19.24	28.57
CDX99038	Canola	extracellular	23.02	28.51
AT1G69295.1	Thale cress	extracellular	21.65	28.38
Bra019700.1-P	Field mustard	extracellular	18.9	27.92
CDY65205	Canola	plasma membrane	18.9	27.78
HORVU5Hr1G096090.6	Barley	plastid	22.34	27.78
HORVU0Hr1G021440.2	Barley	plastid	14.78	27.22
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.99	27.0
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	20.96	26.99
Bra038314.1-P	Field mustard	mitochondrion	20.27	26.11
HORVU1Hr1G091830.4	Barley	extracellular	23.37	25.76
HORVU5Hr1G095450.3	Barley	extracellular	11.68	25.56
HORVU5Hr1G109550.1	Barley	cytosol, plastid	23.37	25.37
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	18.21	25.12
Solyc04g005420.2.1	Tomato	extracellular, vacuole	22.68	21.5
HORVU5Hr1G089770.2	Barley	plastid	13.75	20.73
HORVU3Hr1G056800.1	Barley	extracellular	24.4	20.0
HORVU2Hr1G099430.1	Barley	plastid	15.46	19.57
HORVU7Hr1G108980.1	Barley	extracellular	14.78	19.28
CDY47016	Canola	extracellular	22.68	17.74
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	19.59	13.73

Protein Annotations

EnsemblPlants:HORVU3Hr1G074010.3	EnsemblPlantsGene:HORVU3Hr1G074010	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SMART:SM00768	UniParc:UPI000B472EA9	UniProt:A0A287LNH9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:+:556604817..556606423

Molecular Weight (calculated)

28562.1 Da

IEP (calculated)

7.753

GRAVY (calculated)

-0.147

Length

291 amino acids

Sequence
(BLAST)

001: LGPKSTPSGM VGKSGKEERR GKDVGQPAAD IKHIAGGKLT THYFSGVRSA ATPHTPHQQP ASHRRRTLDP SQPAEQSAGA LARTSTNAPP IVVMMASPAF
101: LLLLLLAASI GGSEADWCVC RPDANETALQ ETLDYACGQG ADCAPVGTGG SCHSPDSVAA HCSYAVNSYY QRNSQTKGAT CDFGGTATLS SADPSSGTCK
201: YPASASAAGT STGNGTATGS GAGTGTSPSS PGSTNPATPG MGGSFTTPIG SASGPTASII GPESSGVAAA AAAFAGVRGL FGVAVASVLA F

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.