Factsheet for HORVU2Hr1G099430.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042912_P001	Maize	nucleus	49.13	63.48
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	88.7	57.14
TraesCS2A01G425000.1	Wheat	plastid	89.13	56.79
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	86.09	55.62
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	61.74	43.29
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	38.7	43.2
HORVU5Hr1G089770.2	Barley	plastid	33.91	40.41
KRH43685	Soybean	plastid	41.74	38.71
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	39.57	35.97
PGSC0003DMT400025000	Potato	nucleus	40.87	33.81
KXG27096	Sorghum	extracellular, vacuole	62.61	33.8
Solyc12g017360.1.1	Tomato	cytosol, peroxisome, plastid	43.04	33.56
KRG90034	Soybean	extracellular, plasma membrane	41.74	32.43
HORVU7Hr1G108980.1	Barley	extracellular	30.87	31.84
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	17.39	31.75
Solyc05g016390.2.1	Tomato	endoplasmic reticulum, extracellular	34.78	31.01
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	40.87	30.03
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	46.96	29.35
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	40.43	28.79
KRH13771	Soybean	vacuole	43.48	27.86
HORVU5Hr1G095450.3	Barley	extracellular	16.09	27.82
Zm00001d026281_P003	Maize	plastid	60.43	25.36
HORVU0Hr1G021440.2	Barley	plastid	16.96	24.68
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	41.3	24.68
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	41.3	24.42
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	40.87	24.04
AT1G79480.1	Thale cress	extracellular	40.87	23.68
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	20.87	21.24
HORVU1Hr1G091830.4	Barley	extracellular	23.48	20.45
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	18.26	19.91
HORVU5Hr1G096090.6	Barley	plastid	19.13	18.8
HORVU5Hr1G109550.1	Barley	cytosol, plastid	19.57	16.79
HORVU3Hr1G056800.1	Barley	extracellular	23.91	15.49
HORVU3Hr1G074010.3	Barley	cytosol, plastid	19.57	15.46
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	26.09	14.46
HORVU2Hr1G033470.1	Barley	cytosol, plastid	17.83	13.8

Protein Annotations

EnsemblPlants:HORVU2Hr1G099430.1	EnsemblPlantsGene:HORVU2Hr1G099430	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237	PFAM:PF07983
SEG:seg	SMART:SM00768	UniParc:UPI000B480761	UniProt:A0A287J4Q2	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr2H:+:687582256..687583251

Molecular Weight (calculated)

20652.0 Da

IEP (calculated)

3.730

GRAVY (calculated)

-0.135

Length

230 amino acids

Sequence
(BLAST)

001: SSSSSSTPPF TSTAPSSTTP SVPDQLPPIT PVPPSFEPSP PXXXXXXXXX XXXXXXXXXX XXSPGLGTPA STPTPINPPQ FAPSPPGTAP PSPIVVVPSP
101: PDEFGPGSGG GGGGGGGGGG FMPPIIYPPP LAPPMAPGAG QALWCVAKPT VPDPILQEAM DYACGSGAEC RSIQPSGACS QPDTVLAHAS YAFNSYWQMT
201: RATGGTCDFG GTATIVTSDP SYDSCAFNLV

Best Arabidopsis Sequence Match ( AT1G79480.1 )
(BLAST)

001: MESYRVFTTI CLLLCLFLSA NFFTHYVVDA RKSVGFEREP KKVMMIKALK HTSLLQKMMT QLNLAQPLDY SSSSNTQPYG VSTTLTLPPY VSLPPLSVPG
101: NAPPFCINPP NTPPSSSYPG LSPPPGPITL PNPPDSSSNP NSNPNPPESS SNPNPPDSSS NPNSNPNPPV TVPNPPESSS NPNPPDSSSN PNSNPNPPES
201: SSNPNPPVTV PNPPESSSNP NPPESSSNPN PPITIPYPPE SSSPNPPEIV PSPPESGYTP GPVLGPPYSE PGPSTPTGSI PSPSSGFLPP IVYPPPMAPP
301: SPSVTPTSAY WCVAKPSVPD PIIQEAMNFA CGSGADCHSI QPNGPCFKPN TLWAHASFAY NSYWQRTKST GGSCTFGGTG MLVTVDPSFN GCHFDFF

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.