Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042912_P001 | Maize | nucleus | 42.99 | 79.21 |
| KXG27096 | Sorghum | extracellular, vacuole | 85.67 | 65.96 |
| HORVU2Hr1G099430.1 | Barley | plastid | 43.29 | 61.74 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 56.4 | 51.82 |
| TraesCS2A01G425000.1 | Wheat | plastid | 56.1 | 50.97 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 55.18 | 50.84 |
| Zm00001d026281_P003 | Maize | plastid | 78.05 | 46.72 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 25.3 | 40.29 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 30.79 | 39.92 |
| KRH43685 | Soybean | plastid | 29.88 | 39.52 |
| PGSC0003DMT400025000 | Potato | nucleus | 30.18 | 35.61 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 33.84 | 35.46 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 30.79 | 34.24 |
| Bra008414.1-P | Field mustard | cytosol, nucleus, plastid, vacuole | 33.54 | 34.06 |
| KRG90034 | Soybean | extracellular, plasma membrane | 29.57 | 32.77 |
| KRH13771 | Soybean | vacuole | 35.67 | 32.59 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 25.61 | 32.56 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 35.06 | 31.25 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.28 | 30.91 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.28 | 30.59 |
| Bra035122.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 35.98 | 30.18 |
| AT1G79480.1 | Thale cress | extracellular | 35.67 | 29.47 |
| Zm00001d007864_P001 | Maize | extracellular | 13.72 | 25.42 |
| Zm00001d006776_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 14.94 | 24.62 |
| Zm00001d006777_P003 | Maize | endoplasmic reticulum, extracellular, vacuole | 14.94 | 24.62 |
| Zm00001d022059_P001 | Maize | endoplasmic reticulum, extracellular | 14.63 | 24.24 |
| Zm00001d016545_P001 | Maize | extracellular | 13.72 | 24.06 |
| Zm00001d043361_P001 | Maize | endoplasmic reticulum, extracellular | 13.72 | 23.94 |
| Zm00001d050544_P001 | Maize | extracellular | 13.11 | 22.99 |
| Zm00001d047293_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 13.72 | 22.96 |
| Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 36.89 | 21.12 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 21.95 | 21.11 |
| Zm00001d029539_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 12.8 | 21.0 |
| Zm00001d046155_P001 | Maize | extracellular | 10.67 | 19.89 |
| Zm00001d009686_P002 | Maize | extracellular | 14.63 | 19.59 |
| Zm00001d013250_P003 | Maize | extracellular | 12.8 | 18.75 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 14.63 | 18.53 |
| Zm00001d010728_P005 | Maize | extracellular | 11.89 | 17.81 |
| Zm00001d011431_P001 | Maize | plasma membrane | 16.46 | 17.48 |
| Zm00001d034062_P001 | Maize | cytosol, golgi, peroxisome | 11.89 | 15.98 |
| Zm00001d038682_P001 | Maize | extracellular | 10.98 | 15.65 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 21.95 | 14.66 |
| Zm00001d012917_P001 | Maize | plasma membrane | 22.87 | 12.23 |
Protein Annotations
| EMBL:BT041552 | EnsemblPlants:Zm00001d002348_P001 | EnsemblPlants:Zm00001d002348_T001 | EnsemblPlantsGene:Zm00001d002348 | EntrezGene:100273642 | InterPro:X8 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | PFAM:PF07983 | PRINTS:PR01217 | ProteinID:ONM14026.1 | SEG:seg |
| SignalP:SignalP-TM | SMART:SM00768 | TMHMM:TMhelix | UniParc:UPI00017B80D7 | UniProt:B4FWR4 | MapMan:35.1 |
Description
Carbohydrate-binding X8 domain superfamily protein
Coordinates
chr2:+:10671529..10673482
Molecular Weight (calculated)
32814.6 Da
IEP (calculated)
5.747
GRAVY (calculated)
-0.223
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKDTVPLV TASGFVVASL LLLLCATRCE ARVMAASRSR SRSTSPLLNV LFKLNFIRTV EPPRRLPTPT ADATVSLAAG DTNSPFCVNP PDAPSSTTPP
101: STSSTSSTTP PSTSSTPSLP GQAQAPPLPP ITPVPPSFEP SPPENGAPGG GQGGGDQGQG GGGQGQGGPP ASTTPNSPPQ AGPGAPFGSV PPSPIVMVPS
201: PPGFGPGPGS GSGGGSGSGD GGGPFQPPIV YPPPLAPPML PGAGQTLWCV AKPTVPDPII QEAMDYACGS GAECDSILPS GACYHPNTVL AHASFAFNSY
301: WQQNKATGGT ATIITRDPSY EKCKFDLL
101: STSSTSSTTP PSTSSTPSLP GQAQAPPLPP ITPVPPSFEP SPPENGAPGG GQGGGDQGQG GGGQGQGGPP ASTTPNSPPQ AGPGAPFGSV PPSPIVMVPS
201: PPGFGPGPGS GSGGGSGSGD GGGPFQPPIV YPPPLAPPML PGAGQTLWCV AKPTVPDPII QEAMDYACGS GAECDSILPS GACYHPNTVL AHASFAFNSY
301: WQQNKATGGT ATIITRDPSY EKCKFDLL
001: MESYRVFTTI CLLLCLFLSA NFFTHYVDAR KSVGFEREPK KVMMIKALKH TSLLQKMMTQ LNLAQPLDYS SSSNTQPYGV STTLTLPPYV SLPPLSVPGN
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.