Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G425000.1 | Wheat | plastid | 94.96 | 93.91 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 92.44 | 92.7 |
| HORVU2Hr1G099430.1 | Barley | plastid | 57.14 | 88.7 |
| Zm00001d042912_P001 | Maize | nucleus | 33.33 | 66.85 |
| Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 51.82 | 56.4 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 27.17 | 47.09 |
| KXG27096 | Sorghum | extracellular, vacuole | 55.74 | 46.71 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 29.69 | 41.9 |
| KRH43685 | Soybean | plastid | 27.45 | 39.52 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 24.09 | 38.74 |
| PGSC0003DMT400025000 | Potato | nucleus | 29.41 | 37.77 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 31.09 | 37.63 |
| KRG90034 | Soybean | extracellular, plasma membrane | 30.25 | 36.49 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 36.41 | 35.33 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 24.65 | 34.11 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 29.69 | 33.87 |
| KRH13771 | Soybean | vacuole | 33.89 | 33.7 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 12.89 | 33.58 |
| Zm00001d026281_P003 | Maize | plastid | 51.26 | 33.39 |
| Bra008414.1-P | Field mustard | cytosol, nucleus, plastid, vacuole | 29.41 | 32.51 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 14.29 | 31.1 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 13.73 | 31.01 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.21 | 29.87 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.21 | 29.56 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 14.29 | 29.48 |
| Bra035122.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 31.65 | 28.9 |
| AT1G79480.1 | Thale cress | extracellular | 31.37 | 28.21 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 13.45 | 26.97 |
| TraesCS5B01G366600.1 | Wheat | plastid | 30.81 | 25.94 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 13.17 | 25.82 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 13.17 | 23.74 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 13.45 | 22.97 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 13.17 | 22.93 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 16.53 | 22.18 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 19.89 | 21.52 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 13.17 | 17.09 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 19.33 | 16.91 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 15.97 | 16.72 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G444800.1 | EnsemblPlantsGene:TraesCS2B01G444800 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:637575579..637576988
Molecular Weight (calculated)
34193.9 Da
IEP (calculated)
4.206
GRAVY (calculated)
-0.132
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MARNCRISSL PPPSLLFFLL LTLCTTTHCE ARALKQSKKN SLMNVLFKLN FARAVEPTQP PPPSSLDASA GSDAASASAS LAAVDAPFCV NPPDAPPSSS
101: STPPFTSTAP SSTTPSVPDQ LPPITPVPPS FEPSPPADGG GSSPGLGTPA STPTPINPPQ FAPSPPGTAP PSPIVVVPSP PDQFGPGSGG GGQGGGVGGG
201: GGGGEGGGGG VGGGGGGGGE GGGGGGVGGG GGGGGEGGGG GGGGGGGFMP PIIYPPPLAP PMAPGAGQAL WCVAKPTVPD PILQEAMDYA CGSGAECRSI
301: QPSGSCSQPD TVLAHASYAF NSYWQMTRAN GGTCDFGGTA TIVTSDPSYD SCAFNLV
101: STPPFTSTAP SSTTPSVPDQ LPPITPVPPS FEPSPPADGG GSSPGLGTPA STPTPINPPQ FAPSPPGTAP PSPIVVVPSP PDQFGPGSGG GGQGGGVGGG
201: GGGGEGGGGG VGGGGGGGGE GGGGGGVGGG GGGGGEGGGG GGGGGGGFMP PIIYPPPLAP PMAPGAGQAL WCVAKPTVPD PILQEAMDYA CGSGAECRSI
301: QPSGSCSQPD TVLAHASYAF NSYWQMTRAN GGTCDFGGTA TIVTSDPSYD SCAFNLV
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.