Factsheet for TraesCS5B01G399400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G398000.1	Wheat	extracellular	84.81	81.71
TraesCS5A01G393200.1	Wheat	extracellular	84.18	79.64
TraesCS5D01G403000.1	Wheat	extracellular	83.54	79.52
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	50.0	62.7
Os03t0756300-01	Rice	extracellular	58.23	52.57
KRH54678	Soybean	extracellular, nucleus	35.44	50.45
HORVU5Hr1G096090.6	Barley	plastid	65.19	44.02
Zm00001d013250_P003	Maize	extracellular	58.86	41.52
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	44.94	39.44
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	59.49	38.52
PGSC0003DMT400045877	Potato	extracellular	25.95	38.32
KXG37528	Sorghum	mitochondrion	62.66	37.36
CDY26741	Canola	extracellular	42.41	36.02
PGSC0003DMT400063348	Potato	extracellular	41.77	35.68
Bra026878.1-P	Field mustard	extracellular	31.65	35.46
Solyc03g115200.2.1	Tomato	extracellular	41.77	35.29
CDY19232	Canola	extracellular	41.77	35.11
CDY02169	Canola	extracellular	43.04	35.05
CDX83826	Canola	extracellular	40.51	34.78
Bra035941.1-P	Field mustard	extracellular	43.67	34.67
CDY16822	Canola	extracellular	43.67	34.67
CDX87201	Canola	extracellular	43.67	34.67
TraesCS5B01G465400.1	Wheat	extracellular, plasma membrane	39.87	34.62
AT1G18650.1	Thale cress	extracellular	39.87	34.24
CDX96707	Canola	extracellular	39.87	34.05
Bra026879.1-P	Field mustard	extracellular	30.38	33.8
CDY23085	Canola	extracellular, plasma membrane, vacuole	41.14	33.68
Bra025116.1-P	Field mustard	extracellular	34.18	33.54
CDY51213	Canola	extracellular	34.18	33.54
Bra029334.1-P	Field mustard	extracellular	41.14	33.33
CDY42854	Canola	extracellular	41.14	33.33
KRH03122	Soybean	extracellular, nucleus	41.77	32.51
AT5G61130.1	Thale cress	extracellular	41.14	32.34
CDY02987	Canola	extracellular	32.91	32.3
CDY16115	Canola	extracellular	31.65	32.26
VIT_17s0000g07260.t01	Wine grape	extracellular	41.14	31.4
CDY65418	Canola	cytosol	29.11	31.29
KRG89485	Soybean	extracellular	34.18	30.68
Bra009313.1-P	Field mustard	extracellular	41.14	30.66
CDX69983	Canola	extracellular	41.14	30.66
Bra012981.1-P	Field mustard	extracellular, vacuole	43.04	30.63
KRH50525	Soybean	extracellular	35.44	30.6
PGSC0003DMT400003054	Potato	extracellular	36.08	29.84
AT2G03505.1	Thale cress	extracellular	31.65	29.76
VIT_01s0011g00570.t01	Wine grape	extracellular	36.08	29.53
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	25.32	29.2
AT5G08000.2	Thale cress	extracellular	39.24	29.11
CDY33795	Canola	extracellular	32.91	29.05
Bra026880.1-P	Field mustard	extracellular	32.91	29.05
CDY16114	Canola	extracellular	32.28	28.49
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.44	28.28
Solyc05g012380.2.1	Tomato	extracellular	36.08	28.22
CDX99038	Canola	extracellular	41.77	28.09
Solyc01g010310.2.1	Tomato	extracellular	33.54	28.04
CDY34558	Canola	extracellular	30.38	27.91
KRH75030	Soybean	extracellular	37.97	27.91
Bra016724.1-P	Field mustard	extracellular	30.38	27.91
CDX96880	Canola	extracellular	30.38	27.91
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.44	27.32
KRH56823	Soybean	extracellular	36.71	27.23
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	30.38	26.97
CDY65205	Canola	plasma membrane	33.54	26.77
KRH70882	Soybean	extracellular	36.71	26.73
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	32.91	26.53
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.91	26.53
PGSC0003DMT400072939	Potato	extracellular	34.18	26.21
CDX98134	Canola	extracellular	31.01	25.65
CDY36415	Canola	extracellular	31.65	25.51
Bra019700.1-P	Field mustard	extracellular	31.01	24.87
TraesCS2B01G272100.1	Wheat	extracellular	27.22	24.86
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	32.28	24.4
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	30.38	24.37
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	32.28	24.17
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	41.77	24.0
Bra004003.1-P	Field mustard	extracellular	32.91	23.85
CDY07353	Canola	extracellular	32.91	23.85
CDY54140	Canola	extracellular	31.01	23.45
CDY04273	Canola	extracellular	32.28	23.39
CDY50312	Canola	extracellular	31.01	22.79
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.91	21.94
AT1G69295.1	Thale cress	extracellular	30.38	21.62
Bra038314.1-P	Field mustard	mitochondrion	29.75	20.8
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	32.28	19.17
CDY47016	Canola	extracellular	41.14	17.47
Solyc04g005420.2.1	Tomato	extracellular, vacuole	32.28	16.61
TraesCS7B01G384100.1	Wheat	extracellular	22.78	16.22
TraesCS3B01G257100.1	Wheat	extracellular	30.38	14.08
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	31.01	13.73
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	28.48	13.64
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	30.38	11.76
TraesCS5B01G366600.1	Wheat	plastid	25.95	9.67

Protein Annotations

EnsemblPlants:TraesCS5B01G399400.1	EnsemblPlantsGene:TraesCS5B01G399400	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:+:576523543..576525288

Molecular Weight (calculated)

16157.0 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.108

Length

158 amino acids

Sequence
(BLAST)

001: MASHAMRLLL LLALAAALAG RSEGAWCVCR TDLPDATLQR TLDYACGSAA AADCKPIQPN AACFAPDNVK AHCSYAVNSF YQRSGQNPLA CVFSGTAVVS
101: STDPSTNGCK YPASATPSAP DSPPPQMAQG PNGPLKDTSG GTGVLPEAPQ APVFHPQP

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.