Factsheet for AT5G61130.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42854	Canola	extracellular	81.59	84.1
Bra029334.1-P	Field mustard	extracellular	81.09	83.59
CDY23085	Canola	extracellular, plasma membrane, vacuole	79.6	82.9
CDY02169	Canola	extracellular	79.6	82.47
CDX87201	Canola	extracellular	80.1	80.9
Bra035941.1-P	Field mustard	extracellular	79.6	80.4
CDY16822	Canola	extracellular	78.61	79.4
Bra012981.1-P	Field mustard	extracellular, vacuole	80.1	72.52
AT5G08000.2	Thale cress	extracellular	66.17	62.44
AT1G18650.1	Thale cress	extracellular	52.24	57.07
GSMUA_Achr7P26650_001	Banana	extracellular	24.88	43.1
GSMUA_Achr9P07140_001	Banana	extracellular	39.8	43.01
GSMUA_Achr4P23440_001	Banana	cytosol	31.34	42.0
CDY47016	Canola	extracellular	77.61	41.94
TraesCS5B01G399400.1	Wheat	extracellular	32.34	41.14
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	36.82	41.11
Os07t0600700-01	Rice	extracellular	39.3	40.72
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	38.81	40.62
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.81	39.39
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	37.31	39.27
TraesCS5B01G398000.1	Wheat	extracellular	31.84	39.02
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.81	39.0
GSMUA_Achr8P28170_001	Banana	extracellular	29.85	38.71
AT2G03505.1	Thale cress	extracellular	31.84	38.1
GSMUA_Achr5P08900_001	Banana	extracellular	35.82	37.89
TraesCS3A01G302400.1	Wheat	extracellular	36.82	37.76
TraesCS5A01G393200.1	Wheat	extracellular	31.34	37.72
Os03t0756300-01	Rice	extracellular	32.84	37.71
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	37.31	37.69
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	37.31	37.69
EER97492	Sorghum	extracellular	36.32	37.63
TraesCS5D01G403000.1	Wheat	extracellular	30.85	37.35
TraesCS3D01G299600.1	Wheat	extracellular	36.32	37.24
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.81	37.07
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	34.33	36.7
OQU87600	Sorghum	extracellular	34.33	36.7
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	35.32	35.86
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	22.39	35.71
Os01t0763900-01	Rice	extracellular	36.32	35.27
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	32.84	35.11
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	32.84	34.74
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.83	34.34
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.33	34.01
AT5G35740.1	Thale cress	extracellular	19.9	33.61
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	34.83	33.18
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	38.81	32.1
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	31.34	31.98
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	31.34	31.5
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.35	31.12
Zm00001d013250_P003	Maize	extracellular	33.33	29.91
AT2G04910.1	Thale cress	extracellular	18.41	29.84
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	30.85	29.38
AT1G69295.1	Thale cress	extracellular	32.34	29.28
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	30.35	29.19
AT4G13600.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	32.34	28.14
Os05t0512600-01	Rice	extracellular	31.84	28.07
Zm00001d010728_P005	Maize	extracellular	30.35	27.85
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.85	27.65
EES18492	Sorghum	extracellular	31.34	27.51
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	37.31	27.27
TraesCS1A01G332500.1	Wheat	extracellular	27.86	26.79
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	32.34	26.64
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	29.85	26.55
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	25.87	26.4
HORVU2Hr1G033470.1	Barley	cytosol, plastid	38.81	26.26
HORVU3Hr1G074010.3	Barley	cytosol, plastid	37.31	25.77
KXG37528	Sorghum	mitochondrion	33.83	25.66
TraesCS5A01G548300.1	Wheat	plasma membrane	24.88	25.51
HORVU5Hr1G096090.6	Barley	plastid	29.35	25.21
AT4G05430.3	Thale cress	extracellular, plasma membrane	20.4	24.4
Zm00001d038682_P001	Maize	extracellular	27.86	24.35
AT2G30933.1	Thale cress	extracellular	24.88	22.03
AT1G09460.1	Thale cress	extracellular, vacuole	30.85	18.79
AT1G29380.1	Thale cress	extracellular	28.86	18.41
AT3G58100.2	Thale cress	cytosol	20.9	16.41
AT5G67460.1	Thale cress	vacuole	21.39	11.32
AT1G79480.1	Thale cress	extracellular	19.9	10.08

Protein Annotations

MapMan:35.1	EntrezGene:836234	UniProt:A0A178URD1	ProteinID:AED97424.1	ArrayExpress:AT5G61130	EnsemblPlantsGene:AT5G61130
RefSeq:AT5G61130	TAIR:AT5G61130	RefSeq:AT5G61130-TAIR-G	EnsemblPlants:AT5G61130.1	TAIR:AT5G61130.1	Unigene:At.29122
ProteinID:BAB10375.1	EMBL:BT003876	EMBL:BT005195	GO:GO:0001872	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0009505	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0016787	GO:GO:0030054	GO:GO:0030246	GO:GO:0030247	GO:GO:0030312	GO:GO:0031225
GO:GO:0046658	GO:GO:0052543	RefSeq:NP_200921.2	ProteinID:OAO95251.1	Symbol:PDCB1	PFAM:PF07983
PO:PO:0000005	PO:PO:0000013	PO:PO:0000036	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020039	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	UniProt:Q9FNQ2	SMART:SM00768
SignalP:SignalP-noTM	UniParc:UPI000000C1B8	InterPro:X8	SEG:seg	:	:

Description

PDCB1PDCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178URD1]

Coordinates

chr5:-:24587173..24589580

Molecular Weight (calculated)

20365.6 Da

IEP (calculated)

7.571

GRAVY (calculated)

-0.122

Length

201 amino acids

Sequence
(BLAST)

001: MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT
101: GCAFPTSASG SSGSTTVTPG TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS SKLFICLLLI ASSGFCSFLM
201: L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.