Factsheet for Zm00001d043361_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87600	Sorghum	extracellular	86.17	86.17
TraesCS3A01G302400.1	Wheat	extracellular	60.64	58.16
KRH54678	Soybean	extracellular, nucleus	34.04	57.66
TraesCS3D01G299600.1	Wheat	extracellular	59.57	57.14
Os01t0763900-01	Rice	extracellular	60.64	55.07
GSMUA_Achr7P26650_001	Banana	extracellular	29.26	47.41
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	47.34	44.72
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	47.34	44.72
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	45.74	43.43
GSMUA_Achr8P28170_001	Banana	extracellular	35.64	43.23
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	43.09	42.19
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	42.55	41.88
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	60.64	41.45
GSMUA_Achr9P07140_001	Banana	extracellular	40.43	40.86
PGSC0003DMT400045877	Potato	extracellular	22.87	40.19
GSMUA_Achr5P08900_001	Banana	extracellular	40.43	40.0
PGSC0003DMT400063348	Potato	extracellular	39.36	40.0
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	41.49	39.8
Solyc03g115200.2.1	Tomato	extracellular	39.36	39.57
HORVU3Hr1G074010.3	Barley	cytosol, plastid	60.11	38.83
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	40.96	38.5
KRH03122	Soybean	extracellular, nucleus	40.96	37.93
CDY42854	Canola	extracellular	38.83	37.44
AT1G18650.1	Thale cress	extracellular	36.17	36.96
Bra029334.1-P	Field mustard	extracellular	38.3	36.92
CDX83826	Canola	extracellular	35.64	36.41
VIT_01s0011g00570.t01	Wine grape	extracellular	37.23	36.27
CDX96707	Canola	extracellular	35.64	36.22
Bra035941.1-P	Field mustard	extracellular	38.3	36.18
CDX87201	Canola	extracellular	38.3	36.18
CDY16822	Canola	extracellular	38.3	36.18
Bra026878.1-P	Field mustard	extracellular	27.13	36.17
Zm00001d010728_P005	Maize	extracellular	42.02	36.07
CDY26741	Canola	extracellular	35.64	36.02
CDY16114	Canola	extracellular	34.04	35.75
CDY23085	Canola	extracellular, plasma membrane, vacuole	36.7	35.75
CDY16115	Canola	extracellular	29.26	35.48
Bra026879.1-P	Field mustard	extracellular	26.6	35.21
Bra026880.1-P	Field mustard	extracellular	33.51	35.2
CDY33795	Canola	extracellular	33.51	35.2
CDY51213	Canola	extracellular	29.79	34.78
CDY19232	Canola	extracellular	34.57	34.57
CDY02169	Canola	extracellular	35.64	34.54
AT5G61130.1	Thale cress	extracellular	36.7	34.33
VIT_17s0000g07260.t01	Wine grape	extracellular	37.77	34.3
Zm00001d016545_P001	Maize	extracellular	34.04	34.22
Bra025116.1-P	Field mustard	extracellular	29.26	34.16
CDY02987	Canola	extracellular	28.72	33.54
KRG89485	Soybean	extracellular	31.38	33.52
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	43.09	33.33
KRH56823	Soybean	extracellular	37.77	33.33
Zm00001d050544_P001	Maize	extracellular	32.98	33.16
KRH50525	Soybean	extracellular	31.91	32.79
CDX98134	Canola	extracellular	32.98	32.46
CDY65418	Canola	cytosol	25.0	31.97
KRH70882	Soybean	extracellular	36.7	31.8
Zm00001d038682_P001	Maize	extracellular	38.83	31.74
Solyc05g012380.2.1	Tomato	extracellular	34.04	31.68
KRH75030	Soybean	extracellular	36.17	31.63
AT2G03505.1	Thale cress	extracellular	28.19	31.55
Bra016724.1-P	Field mustard	extracellular	28.19	30.81
CDX96880	Canola	extracellular	28.19	30.81
Zm00001d013250_P003	Maize	extracellular	36.7	30.8
Bra009313.1-P	Field mustard	extracellular	34.57	30.66
CDX69983	Canola	extracellular	34.57	30.66
PGSC0003DMT400072939	Potato	extracellular	33.51	30.58
AT5G08000.2	Thale cress	extracellular	34.57	30.52
Bra012981.1-P	Field mustard	extracellular, vacuole	35.64	30.18
CDY36415	Canola	extracellular	31.38	30.1
CDY34558	Canola	extracellular	27.13	29.65
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	38.3	29.51
Bra019700.1-P	Field mustard	extracellular	30.85	29.44
Zm00001d007864_P001	Maize	extracellular	27.66	29.38
Zm00001d046155_P001	Maize	extracellular	26.6	28.41
PGSC0003DMT400003054	Potato	extracellular	28.72	28.27
CDX99038	Canola	extracellular	34.57	27.66
Solyc01g010310.2.1	Tomato	extracellular	27.66	27.51
Bra004003.1-P	Field mustard	extracellular	29.79	25.69
CDY04273	Canola	extracellular	29.79	25.69
CDY07353	Canola	extracellular	29.79	25.69
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.6	25.51
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	26.6	25.51
CDY54140	Canola	extracellular	28.19	25.36
Zm00001d009686_P002	Maize	extracellular	32.98	25.31
CDY65205	Canola	plasma membrane	26.6	25.25
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	26.06	24.87
CDY50312	Canola	extracellular	28.19	24.65
AT1G69295.1	Thale cress	extracellular	28.72	24.32
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	27.13	24.17
Zm00001d042912_P001	Maize	nucleus	22.87	24.16
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	31.91	23.17
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.72	22.78
Bra038314.1-P	Field mustard	mitochondrion	26.6	22.12
Zm00001d011431_P001	Maize	plasma membrane	31.91	19.42
Solyc04g005420.2.1	Tomato	extracellular, vacuole	31.38	19.22
CDY47016	Canola	extracellular	37.77	19.09
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	27.66	15.25
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	23.94	13.72
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	30.32	11.61
Zm00001d012917_P001	Maize	plasma membrane	31.91	9.79
Zm00001d026281_P003	Maize	plastid	27.66	9.49
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	26.06	8.55

Protein Annotations

EMBL:BT085847	EMBL:EU969175	EnsemblPlants:Zm00001d043361_P001	EnsemblPlants:Zm00001d043361_T001	EnsemblPlantsGene:Zm00001d043361	EntrezGene:100284648
InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118	PFAM:PF07983	ProteinID:ONM37692.1	SEG:seg
SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI000182D581	UniProt:B6TW10	MapMan:35.1	:

Description

PLASMODESMATA CALLOSE-BINDING PROTEIN 2

Coordinates

chr3:+:197706877..197708271

Molecular Weight (calculated)

18664.8 Da

IEP (calculated)

5.593

GRAVY (calculated)

0.105

Length

188 amino acids

Sequence
(BLAST)

001: MEPLVFVLLL VAMPLRGSDG AWCVCRPDVS DAALQKTLDY ACGHGADCAA VLPTGPCYSP TTVRAHCSYA ANSYFQQNSQ ANGGATCDFG GTANLTDTDP
101: SSGTCKYPAT PSEAGTSGNA TGTGTAPPGS TSNPATTPSM GGSVTTTPVG AFGPAPSTFS AATATAAAFG GRRALLLAVV SVLSFLAR

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.